Gene Information

Name : Rvan_2886 (Rvan_2886)
Accession : YP_004013191.1
Strain : Rhodomicrobium vannielii ATCC 17100
Genome accession: NC_014664
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3142056 - 3142835 bp
Length : 780 bp
Strand : -
Note : KEGG: ret:RHE_CH02075 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA

DNA sequence :
ATGCCCGGCGAGCTTGTTCTTCCCCCGCCAGCGGCGCGGCCATTTCGACCCGCGGCAGCAGGGACCGTAAAAGAGGGTGC
GGTGGAAACGCTGGCCGAGTTCAGGCAGGTGTCGAAGCTCTACGGCAGCGGTGAGGCGACCGTGCGCGCGCTCGACCGTA
TGGATCTGTCCATCGGCCGTGGCGAGTTCGTCGCGATCATGGGGCCGTCCGGCTCCGGCAAGTCCACCGCGATGAACATT
CTCGCCTGCCTCGATACGCCGACGAGCGGCGAATATCTGTTCATGGGTGTCGATGTCGGCTCGCTCGACCGCGTGCAACG
CGCGCTGCTTCGCCGCCACTACCTTGGCTTCGTGTTCCAGGGCTTCAACCTCCTGACGCGCACGAGCGCTATCGATAATG
TGGAGATGCCGCTCATCTATCGCGGCATGGGGCGTTCGGAGCGCCGCGAACGCGCGCGGGCGGCGCTTGCGCTCGTTGGC
CTTTCGGGACGCGAGAAGCACACACCCGCCGAGCTTTCCGGCGGCCAGCAACAGCGCGTCGCCATCGCCCGTGCGCTCGT
CTCCGAACCGTCGGTCATGCTTGCCGACGAACCGACCGGCAACCTCGACAGCGCGCGCAGCCGCGAAATCATGGACCTTC
TCACCGCGCTCAACCGCGATGCCGGTTTGACTGTCATCCTTGTCACGCATGAGCCCGAGATGGCGGCCTATGCATCGCGC
GTTCTGCATGTGGAGGACGGCCGCGTGAGCCGCATCGAGGAAAGGGCCATCGCGCCGTGA

Protein sequence :
MPGELVLPPPAARPFRPAAAGTVKEGAVETLAEFRQVSKLYGSGEATVRALDRMDLSIGRGEFVAIMGPSGSGKSTAMNI
LACLDTPTSGEYLFMGVDVGSLDRVQRALLRRHYLGFVFQGFNLLTRTSAIDNVEMPLIYRGMGRSERRERARAALALVG
LSGREKHTPAELSGGQQQRVAIARALVSEPSVMLADEPTGNLDSARSREIMDLLTALNRDAGLTVILVTHEPEMAAYASR
VLHVEDGRVSRIEERAIAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 9e-25 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-23 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-25 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-25 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rvan_2886 YP_004013191.1 ABC transporter NC_012469.1.7686878. Protein 2e-43 53
Rvan_2886 YP_004013191.1 ABC transporter NC_008702.1.4606598. Protein 6e-35 49
Rvan_2886 YP_004013191.1 ABC transporter CP001581.1.gene798.p Protein 3e-32 44