Gene Information

Name : Rvan_2476 (Rvan_2476)
Accession : YP_004012791.1
Strain : Rhodomicrobium vannielii ATCC 17100
Genome accession: NC_014664
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 2698278 - 2699882 bp
Length : 1605 bp
Strand : +
Note : KEGG: bja:bll2159 transposase

DNA sequence : 
ATGATTGCAGCTACGGATCAGCTCCCTGACGATATCGGCGTCCTGAAAGCTCTGGTGGCGCACTGGGCGGAACAAGCGTC
GGCGAAAGACGCAGCGCTCGCCGAAAAGGACGCCGAACTGGCCCGCGTTCAGGGCGCCAATGCGAGGTGGGAGACGCTGC
GCCAGCTGCGTCGCGCGCAGTTCGGCCGCAAATCGGAGAAGCTCGATCCCGATCAGTTGAGCCTCGCCATGGAGGAGACC
GAGCAGGCGATCGCCGAAACGGGTGCCACGGATGAGACCTCGAACGCGACGCTGAAAGCGTCGCGCAAAGGACCCCGCTC
TGTCAATCGCGGGGCGCTGCCCTCCCATCTGCCGCGGGAGGAGATCGTCATCGAACCGGAAAGCACAGCTTGTCCGTGTT
GTGGCGGCGCCATGCATGTGATGGGCGAGGATCGCTCGGAGCGGCTGGACGTGATCCCGGCCCAGTTCAAAGTGATCGTG
ACGCGCCGACCGAAATATGCCTGCCGGGCCTGCGAAGGCGCTGTGTTTCAGGCTCGGGCGCCAACGCGTCTGATCGAGGC
CGGCATCCCGACCGAGGCACTGGTCGCTCACGTTCTGACCGCGAAATATGCCGATCACTGTCCGCTGTATCGGCAGGCGC
AAATCTATCGCCGCCAGGGCGTCGATCTCGATCGCTCCACGCTCGCTGACTGGGTCGGCAAAGCGGCGGCGCTTCTGGCG
CCGCTTCAGACGCGCCTGTTCGAGATCCTGAAAACCTCGCCGAAACTGTTCGCCGACGAGACGCGCTGCCCCGTCCTGGA
TCCGGGACGAAAGCGCGTGAAGCTCGGCCAGCTCTGGGCTTACGCCCGCGACGACAGGCCCTGGGGCGGCTCCGATCCGC
CCGCCGTTGTCTACTGCTATGCGCCAGGCCGCGGATCGGAGCATGTGAAAAGCCATCTCGCAGGCTTCAGCGGGATCCTG
CAGGTCGATGGCTATAGCGCCTACAAGGACCTCGCGAGCAACCGGCCAGCGTCGGCACCGCTCATCCTGTCCTTCTGCTG
GACGCACCTGAGGAGGCGGTTCTATGAAATCGCTGTGGGCGGCAACGCGCCGCTCGCCGACGCCGCGCTCGCGCAGATCG
CAGCGCTTTACAAAATCGAGGAAACCATCCGTGGCCAGAGCGCCGAAGCGCGCCGCAAGGTCCGACAGGCCAAGAGCATG
CCGCTACTCGATCGTTTCAAGTCCTGGTTTGAAAAGACCCTCTCCCTCGTTCCCGGCGGCTCCAAAATGGCCAAGGCCAT
CCGCTATGCTCTCCACCATTGGGACGGCCTCATCCTGTTCGCGAACGACGGGCGCATCGAGATGGACACCAACACCGTCG
AGCGTTCCATCAGGCCCTTGGCTCTGAACAGGAAAAACGCACTCTTCGCCGGCCACGACCGCGGAGCAGAGCATTGGGGA
ATCGTCGCTTCGCTCATTGAAACGGCCAAACTCAATGGCGTCGATCCACAGGCCTGGCTCGCCAGCATTCTCTCACGCCT
CGTCAATGGCTGGCCGATGCGCAAAATCGATGAACTCATGCCCTGGGCCTTTGCCGTTCACCAAAAGGCTGCTCCCGTGG
TCTGA

Protein sequence : 
MIAATDQLPDDIGVLKALVAHWAEQASAKDAALAEKDAELARVQGANARWETLRQLRRAQFGRKSEKLDPDQLSLAMEET
EQAIAETGATDETSNATLKASRKGPRSVNRGALPSHLPREEIVIEPESTACPCCGGAMHVMGEDRSERLDVIPAQFKVIV
TRRPKYACRACEGAVFQARAPTRLIEAGIPTEALVAHVLTAKYADHCPLYRQAQIYRRQGVDLDRSTLADWVGKAAALLA
PLQTRLFEILKTSPKLFADETRCPVLDPGRKRVKLGQLWAYARDDRPWGGSDPPAVVYCYAPGRGSEHVKSHLAGFSGIL
QVDGYSAYKDLASNRPASAPLILSFCWTHLRRRFYEIAVGGNAPLADAALAQIAALYKIEETIRGQSAEARRKVRQAKSM
PLLDRFKSWFEKTLSLVPGGSKMAKAIRYALHHWDGLILFANDGRIEMDTNTVERSIRPLALNRKNALFAGHDRGAEHWG
IVASLIETAKLNGVDPQAWLASILSRLVNGWPMRKIDELMPWAFAVHQKAAPVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 3e-90 43
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 1e-84 42
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 2e-84 42
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 5e-85 42
unnamed AAC31494.1 L0015 Not tested LEE Protein 4e-85 42
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 5e-85 42
tnp AEA34686.1 transposase Not tested Not named Protein 7e-86 42
unnamed AAL57570.1 unknown Not tested LEE Protein 4e-85 42
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 3e-85 42
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 2e-82 41
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 3e-84 41
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 4e-85 41
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 3e-84 41
unnamed AAL08460.1 unknown Not tested SRL Protein 5e-60 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rvan_2476 YP_004012791.1 transposase VFG0793 Protein 2e-85 42
Rvan_2476 YP_004012791.1 transposase VFG1051 Protein 3e-60 41