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Name : Rvan_2446 (Rvan_2446) Accession : YP_004012763.1 Strain : Rhodomicrobium vannielii ATCC 17100 Genome accession: NC_014664 Putative virulence/resistance : Unknown Product : IstB domain-containing protein ATP-binding protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1484 EC number : - Position : 2666757 - 2667554 bp Length : 798 bp Strand : + Note : KEGG: bbt:BBta_p0100 insertion sequence IS21-like; ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: ATPase AAA DNA sequence : ATGTCTTCCTGCGATGACCGGCTTTTGGACATGCTCGGCAAGCTCAAGCTGTTCGGCGTCCGCGACCGGCTCGACAGCCT GCTCGACGAGGCCTCCCGTTCCGACCTCGACATGCGCCAGACGCTGACGCTGCTCCTGGAGCGTGAGATTGCGCGCAAGG ACGCGCGCCGGATCGAGATGGCGCTGAAGCTCGCTCACTTCCCGATGGTCCGGGACCTCACAGGCTTCGACTTCGCGGCG CAGCCCTCCGTCGACGCCAGACAAGTGCGCGATCTCGCGGCTGGACGCTGGATCGCCAATAGCGAGAATGTGCTCCTGCT CGGGCCGCCCGGCGTCGGGAAAACCCATCTCGCCATCGCGCTCGGGCGCGAGGCCATTCTGGCGGGTTACGCCGCGCTCT TCATGCCGGCGACGGCGCTGGTGGTGCAACTCGCCAGGGCACATGTGGAAGGCCGGCTCGAGGATCGGCTCATGCACTTC GCCAAACCGAAGCTCCTGATCGTGGACGAACTGGGCTACCTGCCATTCGAGCCCTCTGCGGCGCATCTGTTCTTCCAGCT TGTCTCGCGCCGCTACGAAAAGGGAGCGATGCTGATCACGTCCAACCGCAGCGTCGGCGAATGGGACGCGGTGTTCGGCG ATCCGGTCGTGGCGACCGCGATCCTCGACCGCTTGCTCCATCACAGCCACGTCATAACCATCCGCGGCGACAGCTACCGC CTCAAGGAAAAACGTCGCAGCGGTCTTCTGCAGAAGACCGCTGCGACAGAACCAAAGCCTCAAAGGACTGATCAATGA Protein sequence : MSSCDDRLLDMLGKLKLFGVRDRLDSLLDEASRSDLDMRQTLTLLLEREIARKDARRIEMALKLAHFPMVRDLTGFDFAA QPSVDARQVRDLAAGRWIANSENVLLLGPPGVGKTHLAIALGREAILAGYAALFMPATALVVQLARAHVEGRLEDRLMHF AKPKLLIVDELGYLPFEPSAAHLFFQLVSRRYEKGAMLITSNRSVGEWDAVFGDPVVATAILDRLLHHSHVITIRGDSYR LKEKRRSGLLQKTAATEPKPQRTDQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| y1094 | CAD33719.1 | ORF B protein | Not tested | PAI I 536 | Protein | 2e-39 | 46 |
| s0036 | CAD33774.1 | ORF B protein | Not tested | PAI I 536 | Protein | 5e-46 | 41 |
| YPTB1586 | YP_070114.1 | transposase/IS protein | Not tested | HPI | Protein | 6e-46 | 41 |
| y1093 | CAD42087.1 | OrfB protein of IS100 transposase | Not tested | PAI II 536 | Protein | 5e-46 | 41 |
| unnamed | CAA21402.1 | - | Not tested | HPI | Protein | 6e-46 | 41 |
| orfB | CAE85183.1 | OrfB protein, transposase, IS100 | Not tested | PAI V 536 | Protein | 5e-46 | 41 |
| api84 | CAF28558.1 | putative transposase | Not tested | YAPI | Protein | 5e-46 | 41 |
| y1093 | CAC43411.1 | IS100 transposase; transposase ORFA | Not tested | PAI III 536 | Protein | 5e-46 | 41 |
| unnamed | CAB46598.1 | IS100 transposase | Not tested | HPI | Protein | 5e-46 | 41 |
| YPO1901 | YP_002346891.1 | transposase/IS protein | Not tested | HPI | Protein | 6e-46 | 41 |
| y2410 | NP_669717.1 | transposase/IS protein | Not tested | HPI | Protein | 6e-46 | 41 |
| aec58 | AAW51741.1 | Aec58 | Not tested | AGI-3 | Protein | 1e-45 | 41 |
| istB | AAN62229.1 | putative NTP-binding protein of insertion sequence | Not tested | PAGI-3(SG) | Protein | 1e-36 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rvan_2446 | YP_004012763.1 | IstB domain-containing protein ATP-binding protein | VFG1460 | Protein | 1e-39 | 46 |
| Rvan_2446 | YP_004012763.1 | IstB domain-containing protein ATP-binding protein | VFG1515 | Protein | 3e-46 | 41 |
| Rvan_2446 | YP_004012763.1 | IstB domain-containing protein ATP-binding protein | VFG1627 | Protein | 3e-46 | 41 |
| Rvan_2446 | YP_004012763.1 | IstB domain-containing protein ATP-binding protein | VFG1606 | Protein | 3e-46 | 41 |
