Gene Information

Name : Rvan_2409 (Rvan_2409)
Accession : YP_004012732.1
Strain : Rhodomicrobium vannielii ATCC 17100
Genome accession: NC_014664
Putative virulence/resistance : Unknown
Product : argininosuccinate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0165
EC number : -
Position : 2625463 - 2626860 bp
Length : 1398 bp
Strand : -
Note : KEGG: pla:Plav_1602 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase

DNA sequence :
ATGGCCAATAAAATGTGGGGCGGGCGCTTCGAGACAAAGCCCGCCGAAATCATGGAGGAGATCAACGCCTCCATCTCGTT
CGACCAGCGGTTCTATGCGGAGGACATCCGCGCTTCTCAGGCGCATGCCAGGATGCTCGGCGCGTGCGGGATCGTTACGC
CCGAAGAGGCCGACGCGATCGTCGCGGGCCTCGATACGGTGCGCGAGGAGATCGAGGGCGGGCGCTTTGAGTTCCGCCGC
GAATATGAAGACATCCACATGGCGGTGGAAGCGCGGCTGAAGGACATCATCGGCCCGGTCGCGGGCAAGCTCCACACCGG
CCGCTCGCGCAACGATCAGGTGGCGACGGATTTCCGCCTCTATATTCGGGGCGCGATCGATCATCTCGACGAGCAAATCA
CCACGCTCCAGCTCGCGCTTGCGACGAAGGCCAAGGCTCACGCCGCTACCATCATGCCGGGCTTTACGCATATGCAGGTG
GCGCAGCCGGTCACTTTCGGCCACCACTGCCTCGCCTATGTCGAGATGCTGGACCGCGACCGTGGCCGCTTCGCCGACGC
AAGGGCGCGCGTGAACGAAAGCCCGCTCGGCGCGGCCGCGCTCGCCGGCACGTCGTTCCCCATCGACCGGCACATGACTG
CGTCCGCGCTCGGCTTCGCGCGCCCCCTCGCGAACTCGCTCGACTCCGTGTCCTCGCGCGACTTCGCGCTGGAAACGCTC
GCCGCCGCCGCGATCTGCGCCACGCACCTCTCGCGCCTGTCGGAAGAGATCGTCGTCTGGTTCAGCGCGGGCTTCAAATT
CATCACGCTGTCCGACCGCTTCACCACCGGCTCGTCGATCATGCCGCAGAAGCGCAACCCGGACGCTGCCGAACTCGTGC
GCGCCAAGGTGGGTCGCATCGCGGGCGCGTTCGTTTCACTGCTGACGGTGATGAAGGGCCTGCCGCTCGCCTATTCCAAG
GACATGCAGGAAGACAAGGAGGCCGTGTTCCTCGCCATCGACGCGCTGTCGCTCGGCCTCGCCGCGATGACGGGCATGAT
CGAGGACATGGAGCCGGTGCCAGAGCGCATGCGCGACGCCGCCGGTCAGGGCTTCTCGACCGCGACCGACCTTGCAGACT
GGCTCGTGCTGCACGCGCAGCTTCCATTCCGTGAGGCGCATCACGTCACAGGCCGCATCGTGAAGCATGCCGAAAACCTC
GGCGTCGATCTTCATGAGGTGCCGCTGAAGGATATGCAGGCCGTCGAGCCGCGTATCACGGAGCGCATTTTCGACGTGCT
GAACGTGGATAAGTCGGTGGAAAGCCGCCGCAGCTTTGGAGGCACAGCGCCGCAAAATGTGAAGGCGGCGGCTGAAATCT
GGCTGAAGAAGCTGGAAGCCGCCGGAACTTCGCGCTAA

Protein sequence :
MANKMWGGRFETKPAEIMEEINASISFDQRFYAEDIRASQAHARMLGACGIVTPEEADAIVAGLDTVREEIEGGRFEFRR
EYEDIHMAVEARLKDIIGPVAGKLHTGRSRNDQVATDFRLYIRGAIDHLDEQITTLQLALATKAKAHAATIMPGFTHMQV
AQPVTFGHHCLAYVEMLDRDRGRFADARARVNESPLGAAALAGTSFPIDRHMTASALGFARPLANSLDSVSSRDFALETL
AAAAICATHLSRLSEEIVVWFSAGFKFITLSDRFTTGSSIMPQKRNPDAAELVRAKVGRIAGAFVSLLTVMKGLPLAYSK
DMQEDKEAVFLAIDALSLGLAAMTGMIEDMEPVPERMRDAAGQGFSTATDLADWLVLHAQLPFREAHHVTGRIVKHAENL
GVDLHEVPLKDMQAVEPRITERIFDVLNVDKSVESRRSFGGTAPQNVKAAAEIWLKKLEAAGTSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00324 YP_008207789.1 Argininosuccinate lyase Not tested AbaR25 Protein 6e-89 54
BJAB0868_00328 YP_008211654.1 Argininosuccinate lyase Not tested AbaR26 Protein 6e-89 54