Gene Information

Name : Rvan_2310 (Rvan_2310)
Accession : YP_004012633.1
Strain : Rhodomicrobium vannielii ATCC 17100
Genome accession: NC_014664
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 2524709 - 2525452 bp
Length : 744 bp
Strand : +
Note : KEGG: xau:Xaut_1758 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA

DNA sequence :
TTGCAATTCCCCTCGGTTTCCGAAGCGCCGCACGCAGGCACCCCTCGCCGCGCCGCACCCGTCATAGATCTGAAAGGCGT
AACGCTCACGCTGAAAAGCCGCGCGGGCTCCGTCGACATCCTGCGCGGTATCGATCTCGCCGTGCCCGAGGGCCAGTCCG
TGGCGCTCGTCGGGCCGAGCGGTTCCGGCAAATCGTCGCTGCTCATGGTGATGACCGGCCTCGAAGCCGCCACCTCGGGC
CGCGTCGTCGTCGCGGGCGAGGATTTCACGACGCTTGGCGAGGACGCGCTCGCCGCGATCCGGGGTCGCTCCATCGGCAT
CGTGTTCCAGTCCTTCCACCTGATCCCGACCATGACGGCCATCGAGAATGTGGCTCTGCCGCTCGAATTTCTCAATCGCG
CCGATGCGTTCGAGCGAGCGGAGGCGGTGCTTTCCGAGGTCGGGCTGTCGGGGCGCTTTCACCACGTGCCGGGGCAGCTT
TCGGGTGGCGAACAGCAGCGCGTCGCGCTCGCCCGGGCGCTCGTCGCCGAGCCGAAAATCCTGTTCGCGGACGAACCGAC
CGGCAACCTCGACGGAGAGACCGGGCGGCAAATCATGGATCTGATCTTTTCGCTGCATCGCCGCTTCGGCACGACGCTTG
TGCTCGTAACGCATGACACGGCGCTGGCGAAACGCTGCGAGCGCGTCGTCGCCATGCATGACGGGCGGATCGCGGCGTCG
ATCCATGAAACGGCGTCGGCATGA

Protein sequence :
MQFPSVSEAPHAGTPRRAAPVIDLKGVTLTLKSRAGSVDILRGIDLAVPEGQSVALVGPSGSGKSSLLMVMTGLEAATSG
RVVVAGEDFTTLGEDALAAIRGRSIGIVFQSFHLIPTMTAIENVALPLEFLNRADAFERAEAVLSEVGLSGRFHHVPGQL
SGGEQQRVALARALVAEPKILFADEPTGNLDGETGRQIMDLIFSLHRRFGTTLVLVTHDTALAKRCERVVAMHDGRIAAS
IHETASA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-34 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-27 44
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-18 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rvan_2310 YP_004012633.1 ABC transporter NC_008702.1.4606598. Protein 3e-35 43
Rvan_2310 YP_004012633.1 ABC transporter NC_012469.1.7686878. Protein 7e-41 43