Gene Information

Name : Rvan_2213 (Rvan_2213)
Accession : YP_004012537.1
Strain : Rhodomicrobium vannielii ATCC 17100
Genome accession: NC_014664
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 2427700 - 2428641 bp
Length : 942 bp
Strand : -
Note : KEGG: zma:100284619 LOC100284619; TIGRFAM: porphobilinogen deaminase; PFAM: porphobilinogen deaminase

DNA sequence :
ATGAAAAATCACTCAGACGCAAGGCAAATTCGCATCGGTACACGTGGCAGTGCGCTGGCTTTGGCGCAAGCTACGGAAGT
ACAGAACCGCCTGGCCGCGATCTATGGCGACGAGGTCAAATTCGAGCGCGTCGTCATCAAGACGACTGGCGATAAAATCC
TCGACAAGGCCTTGTCTTTGGTTGGCGGCAAGGGGCTTTTCACCAAGGAACTTGAAGAGGCGCTGTTCGCTGACCAGATC
GACATCGCCGTCCATTCGATGAAGGACGTGCAGGCTTTCCTGCCGGATGGGCTTGAAATCGCTTGCAACCTCCCCCGCGA
GGATGTGCGCGACGCGTTCATTTCGATGAAGGCGAAATCGCTTGCAGATATGCCGGAGGGCGCGGTCATCGGCACGGCCT
CCGTCCGCCGCGAAGCCTTCATCAAGAACAAGCGCCCGGACCTGAAGACGGTGCTCTTCCGCGGCAACGTGCAGTCGCGC
CTCAAGAAGCTCGAAGACGGCGTGGCGGACGCGACGCTGCTGGCTTCCGCCGGGCTGAACAGGCTTGGCCTTTCCGACCG
CATCACCCAACATATTCCTGTGGAAGATATGCTGCCCGCGCCTGCGCAGGGCGCCATCGGCATCGAGATCCGCTCGAACG
ATCAGGTGACGCGCGAGCTCATCATGGCGCTGCATGACGAGGCGACCGGCTACGCCATCGACGCCGAGCGCGCCTTCCTC
AGCGAACTCGACGGTTCGTGTCGCACGCCGATTGCCGCGCTCGCCCGCTATGACGGTCACGGCAGGGTGTCGTTCAAGGG
CGCGATCCTCACGCCCGACGGCGCGCGCATCTACGAAACCACCCGCGAGGGCAGCGCGAACGACGCAGCCGCCATGGGCA
AGGACGCCGCGCAGGAGCTTTATGCACGGGGCGGCAAGGATGTGTTCCCCCCGGCGGCCTGA

Protein sequence :
MKNHSDARQIRIGTRGSALALAQATEVQNRLAAIYGDEVKFERVVIKTTGDKILDKALSLVGGKGLFTKELEEALFADQI
DIAVHSMKDVQAFLPDGLEIACNLPREDVRDAFISMKAKSLADMPEGAVIGTASVRREAFIKNKRPDLKTVLFRGNVQSR
LKKLEDGVADATLLASAGLNRLGLSDRITQHIPVEDMLPAPAQGAIGIEIRSNDQVTRELIMALHDEATGYAIDAERAFL
SELDGSCRTPIAALARYDGHGRVSFKGAILTPDGARIYETTREGSANDAAAMGKDAAQELYARGGKDVFPPAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 7e-46 47
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 7e-46 47