Gene Information

Name : Rvan_2073 (Rvan_2073)
Accession : YP_004012399.1
Strain : Rhodomicrobium vannielii ATCC 17100
Genome accession: NC_014664
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 2260137 - 2260970 bp
Length : 834 bp
Strand : -
Note : KEGG: azc:AZC_3162 ATPase; PFAM: ABC transporter related; SMART: ATPase AAA

DNA sequence :
ATGACCCTTGCCGAAGGCGCGTTCGGTCGTCTCGCAAACAGCCGGTCCGTCTCCGAACGGACGGTCATTGCTTCCGAAAA
GGAAAGCGGCGCGTCCGCAGCGGCCAACGCGCGCGTGGCGCCGGGGGGGGAGGGGCTGTCGCTCGCCTTCCGCGCGGTCC
GCAAGTCGTTCGGCGACCGGCAGGTTCTGAAGGATATCGATCTCGAAATCCCGGCCGGGCAGTTCGTCGCCATCGTCGGT
CGCTCGGGCGGCGGCAAGACCACACTCATGCGCCTCATCACCGGCCTCGACGCGCCGACGTCGGGCGAGGTCGTCATTGA
TGGCAAGCCGACGAGCGGGCTTCAGAAAAGCGTGCGCCTCCTGTTTCAGGATGCGCGGCTTCTGCCGTGGGAAACCGTGA
TCGGAAATGTCGGCATAAGCCGCGAGCAGGGCTGGCGTGAAGATGCCGCCGACGCGCTCGCCGATGTCGGCCTTTCGGGG
CGCGAGAAGGACTGGCCCGCTGTGCTTTCAGGCGGGCAGCGACAGCGCGTGTCGCTCGCCCGCGCGCTCGTATCGAGGCC
CGGCATCCTGCTGCTGGACGAGCCGTTCGGTGCACTCGACGCGCTGACGCGCGCGGAGATGCATCAACTGACCGAGCGCA
TCTGGCAGGAGCACGGCTTCACCACCTTGCTTATCACGCACGACGTCGCCGAGGCGGCCACGTTGGCCGACCGCGTTCTG
GTTCTGCGCGACGGGCACATCGCGCTCGACCTCGAAATCGACCTCCCGCGCCCGAGGCGCAGCTACGATCCGGCGGTCGC
TTCTATCGGAGCGAAAATCCTCAGGGAGGTGTGA

Protein sequence :
MTLAEGAFGRLANSRSVSERTVIASEKESGASAAANARVAPGGEGLSLAFRAVRKSFGDRQVLKDIDLEIPAGQFVAIVG
RSGGGKTTLMRLITGLDAPTSGEVVIDGKPTSGLQKSVRLLFQDARLLPWETVIGNVGISREQGWREDAADALADVGLSG
REKDWPAVLSGGQRQRVSLARALVSRPGILLLDEPFGALDALTRAEMHQLTERIWQEHGFTTLLITHDVAEAATLADRVL
VLRDGHIALDLEIDLPRPRRSYDPAVASIGAKILREV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 1e-35 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-24 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-26 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rvan_2073 YP_004012399.1 ABC transporter NC_012469.1.7686878. Protein 1e-27 41