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Name : Rvan_1579 (Rvan_1579) Accession : YP_004011930.1 Strain : Rhodomicrobium vannielii ATCC 17100 Genome accession: NC_014664 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1725335 - 1726720 bp Length : 1386 bp Strand : - Note : TIGRFAM: seryl-tRNA synthetase; KEGG: msl:Msil_0586 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like DNA sequence : GTGCTCGACCTCAAATGGATTCGTGAGAACCCCGCCGACTTCGATCAGGGCCTCGCACGCCGGGGCACGGAGCCGCTGTC GTCCAAAGTGCTGGCGCTCGACGAGGAGCTTCGCGCGCACAAGAAGGCGTTGCAGGATTTGCAGGCGCGGCGCAATGCGG CATCGAAGGAGATCGGCAAGGCGAAGGGCAAGGGCGGCGATCCTGCGAAGGCCGAGGCGCTGATGGCCGAGGTGGCGGAC CTCAAGGGCGCGATTGCGGCGGGCGAGGCGAAGGAGCGCGAGCTTGACGCGGCGATCACCGCGCTGCTCGCGGGCATCCC GAACATGCTGCTGCCCGCGCCGGAGGTGCCGGACGGCAAGGACGAGAGCGAGAATGTCGAGCTTCGCCGCGTCGGCACAC CCCGCGATTTCGCCGCCGAGGACTTCGCGCCGAAGCAGCATTTCGAGTTGGGCGAGGCGCTCGGCCTTATGGATTTCGAG GCGGCGGCGAAGATTTCCGGCGCGCGCTTCACGGTGCTGAAGGGGAAGCTTGCGAGGCTTGAACGCGCGCTCGGCCAGTT CATGCTCGACGTGCAGACGAGCGAGCACGGCTACACCGAGGTGAACCCGCCGTTGCTGGTTAGAGATCGGGCTTTATACG GCACTGCTCAACTTCCGAAATTCGAGGATGACCTATATAAAACCGCCGGAACGACTTCCTTAGGAGATGCAGTTGGGGCA TTTGCGGACGAAGTTGATGTCCGGCGGAACGAAAAAACGGGGCGACAAGAAGCTTTTGAATTGTACTGGCTCATCCCGAC CGCCGAAGTTCCACTCACAAACCTCGTGCGCGAGAGCATCCTCCCCGAAGCCGATCTGCCGCTGCGCTTCACCGCGCTGA CGCCGTGCTTCCGCGCGGAAGCGGGCGCGGCGGGCCGCGACACGCGCGGCATGATCCGCCAGCACCAGTTCTACAAGGTC GAGATGGTGTCGATCACGACGCCCGACGCCTCGGCCGCCGAGCATGAGCGCATGACGAGTTGCGCCGAAGAAATCCTGAA GCGGCTCGGCCTGCCGTATCGCGTCGTCGTGCTGTGCGCGGGCGACACGGGTTTCGGCGCGCGCAAGACGCACGACATCG AAGTTTGGCTGCCGGGACAGGGCGCTTATCGCGAGATTTCAAGCGTGTCGAACTGCGGCGACTTCCAGGCGCGGCGCATG CAGGCGCGCTTCCGGCCCTCGGCCGCGAAGGACTTGCAGTTCGTCCACACGCTGAACGGCTCCGGCCTCGCGGTTGGCCG CGCGCTCATCGCCGTGATCGAAAACTATCAGGAGGCGGATGGCTCGATCCGCGTGCCTGACGCGCTCTTGCCCTACATGG GCGGCGTCACGCGCATCGGAGCATAG Protein sequence : MLDLKWIRENPADFDQGLARRGTEPLSSKVLALDEELRAHKKALQDLQARRNAASKEIGKAKGKGGDPAKAEALMAEVAD LKGAIAAGEAKERELDAAITALLAGIPNMLLPAPEVPDGKDESENVELRRVGTPRDFAAEDFAPKQHFELGEALGLMDFE AAAKISGARFTVLKGKLARLERALGQFMLDVQTSEHGYTEVNPPLLVRDRALYGTAQLPKFEDDLYKTAGTTSLGDAVGA FADEVDVRRNEKTGRQEAFELYWLIPTAEVPLTNLVRESILPEADLPLRFTALTPCFRAEAGAAGRDTRGMIRQHQFYKV EMVSITTPDASAAEHERMTSCAEEILKRLGLPYRVVVLCAGDTGFGARKTHDIEVWLPGQGAYREISSVSNCGDFQARRM QARFRPSAAKDLQFVHTLNGSGLAVGRALIAVIENYQEADGSIRVPDALLPYMGGVTRIGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 9e-85 | 47 |
