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Name : REQ_08940 (REQ_08940) Accession : YP_004005690.1 Strain : Rhodococcus equi 103S Genome accession: NC_014659 Putative virulence/resistance : Virulence Product : clp peptidase ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 950438 - 952870 bp Length : 2433 bp Strand : + Note : - DNA sequence : ATGCCGGCATTCTTCGGGCCCGAGGGGCCCGGGCGCATCGATATCACCCGTCTCATGAGCAGTGACACGCAGCAGCTCAT GGCCGAGGCTGCGCAGTTCGCGGCCCGACGCGGTGACACGGGCCTGGACGCACTGCACATCCTGCACGTGGCCGCGGTCA AGGATCCGGTGCGCGACATGGTCAAGCGAGTGGGTGGGGACCCGGAGGCGATCTCGAAGGACGCGGAGGCGCACCTGCCC CGTGGTCGCGAAGCCGTCTCGATCTCTCCGACGGTCACGGCCGCCGGACGTCGGACGCTGCTCGACGCACACCAGATCGC GCGCGCACTCGGATCGACCTACATCGATCCCGAACACATCTTCCTGTCGCTGGTCTCCAACGGGGACTCGACGACCGGGC GCATCCTCGCGTCCGCCGGTGTCACGCCGGAGTCGATGCAGTCCGCGGTGAACGCGAGTGCTGCGGAGCCGCAGCAGGAG TCGGCCACCCCGACGCTCGACAAGTACGGCACCGACCTGACCGAGCGGGCCCGCTCCGGCGGCGTCGACCCGGTCATCGG ACGTAGCGACGAGATCGAGCAGGCCATCGAGATCCTGGCGCGCCGGACCAAGAACAACCCGGTTCTGGTCGGTGAGGCCG GCGTCGGCAAGACCGCCGTCGTCGAGGGTCTGGCGCAGCGCATCGTCGACGGAGACGTCCCGGAGGTGCTGGCCGACAAG AAGATCGTCCAGCTGGACCTGGCCGGCATGCTGTCCGGAACCCGCTACCGCGGCGACTTCGAGGAGCGGCTGACCAAGGC GGTCGACGAGATCGTCGCGCAGGACGGCCGGCTGATCGTGTTCATCGACGAGCTGCACACCATCGTGGGTGCGGGCGCCG GCGGCGAGGGTGCCATGGATGCCGGAAACATCCTCAAGCCCAAGCTGGCTCGCGGCGATCTCCGCATCGTGGGTGCAACC ACGCTCGACGAGTACCGCAAGCACATCGAGAAGGATCCCGCGCTCGAGCGGCGGTTCCAGCCGGTGACCGTGAACGAGCC CAGCCAGGACGACGCCAAGGCGATCCTGAGCGGGCTGCGCGAGCGGTACGAGGAGCATCACCGCGTCAGCTACACCGACG AGGCGATCTCCGCTGCCGTCGAACTGTCGTCGCGGTACATCGCCGACCGGTACCTGCCGGACAAGGCGATCGACCTGCTC GACCAGGCCGGCGCGCGGAAGCGCCTGCAGCTCGGCGCATCCAATCCGGATGCCAAGGCGCTGCAGCAGCGGATCGCGCG ACTGGAGAAGGCCAAGGAAGATGCGGTGAGCGCCGAGAACTACGAGCGCGCGTCGCAGCTGCGCGACGAGATCGCGGGAG CCGAGAAGCGACTCTCCGAGACTCGCGCAGGTGAGCCCGTCGCGGTGGGGACGCCGTCGGTGACTGCCGAGGACATCGCG GAGATCGTCGCGCGGTCCACGGGAATCCCGGCCAGCCAGATGACGCAGAAGGACAAGGAGCGTCTGCGGCGACTGGAGGA CGAACTGCATCGGCGGGTCGTCGGCCAGGAGGATGCGGTGAAGGCGATCGCACGAGCGGTGCGACGCAGCCGGACCGGCA TGGGTGATCCCCGTCGTCCGGTCGGTAGCTTCCTGTTCCTCGGTCCGACGGGCGTCGGCAAGACGGAACTGGCGAAGGCG TTGGCGCAGTCGCTGTTCGGTGACGAGAGCAAGATGCTGCGGCTCGACATGAGCGAGTTCGGCGAGCGGCACACCGCGAG CCGACTGGTCGGGGCGCCTCCGGGTTACGTCGGCTACGGCGAGGCCGGTCAGCTCACCGAGCAGGTGCGACGTCACCCGT ACTCGGTGATCCTGCTCGACGAGATCGAGAAGGCCCACCCGGATGTGTTCAACGTGCTGCTCCAGGTGCTAGACGACGGA CGGCTCACCGACGGCCAGGGCCGCACGGTGGACTTCAAGAACACCGTCCTGATCATGACGAGCAACCTCGGCTCGGACAT CATCTCGAGCAAGGGCGGGGCGCTGGGCTTCACCACCGGTGACGCCGCGGCGACCGAGAAGCCCCTGCGCGATCGGGTGA TGGGCCGCCTGCGGGAGTCGTTCCGGCCGGAGTTCCTCAACCGGATCGACGAGATCGTGATCTTCCGCAAGCTCGAGGCC GAGCAGCTGCACCGGATCACCGATCTGCTGCTGGGCGAGAGCCGGGATCGCCTGCGGGCTCAGGACATCGACATCGAGTT CACTCCCGATGCGGTGGACTGGATCGCCGAGCACGGGCACCAGCCCGAGTTCGGGGCACGGCCGCTGCGCCGGACCATCG CCCGTGAGGTCGACGACCGAATCGCCGATCTGCTGCTCGACGACGTCCTCGACGCCGGTGGGCGGATCACGGTCAAGGTC ACCGACGACGAACTGGATCTCGTGGTCAGCTGA Protein sequence : MPAFFGPEGPGRIDITRLMSSDTQQLMAEAAQFAARRGDTGLDALHILHVAAVKDPVRDMVKRVGGDPEAISKDAEAHLP RGREAVSISPTVTAAGRRTLLDAHQIARALGSTYIDPEHIFLSLVSNGDSTTGRILASAGVTPESMQSAVNASAAEPQQE SATPTLDKYGTDLTERARSGGVDPVIGRSDEIEQAIEILARRTKNNPVLVGEAGVGKTAVVEGLAQRIVDGDVPEVLADK KIVQLDLAGMLSGTRYRGDFEERLTKAVDEIVAQDGRLIVFIDELHTIVGAGAGGEGAMDAGNILKPKLARGDLRIVGAT TLDEYRKHIEKDPALERRFQPVTVNEPSQDDAKAILSGLRERYEEHHRVSYTDEAISAAVELSSRYIADRYLPDKAIDLL DQAGARKRLQLGASNPDAKALQQRIARLEKAKEDAVSAENYERASQLRDEIAGAEKRLSETRAGEPVAVGTPSVTAEDIA EIVARSTGIPASQMTQKDKERLRRLEDELHRRVVGQEDAVKAIARAVRRSRTGMGDPRRPVGSFLFLGPTGVGKTELAKA LAQSLFGDESKMLRLDMSEFGERHTASRLVGAPPGYVGYGEAGQLTEQVRRHPYSVILLDEIEKAHPDVFNVLLQVLDDG RLTDGQGRTVDFKNTVLIMTSNLGSDIISSKGGALGFTTGDAAATEKPLRDRVMGRLRESFRPEFLNRIDEIVIFRKLEA EQLHRITDLLLGESRDRLRAQDIDIEFTPDAVDWIAEHGHQPEFGARPLRRTIAREVDDRIADLLLDDVLDAGGRITVKV TDDELDLVVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-163 | 49 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-96 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| REQ_08940 | YP_004005690.1 | clp peptidase ATP-binding subunit | VFG0080 | Protein | 9e-156 | 51 |
| REQ_08940 | YP_004005690.1 | clp peptidase ATP-binding subunit | VFG0079 | Protein | 7e-179 | 51 |
