Gene Information

Name : REQ_08030 (REQ_08030)
Accession : YP_004005603.1
Strain : Rhodococcus equi 103S
Genome accession: NC_014659
Putative virulence/resistance : Virulence
Product : ABC transporter ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 841427 - 842239 bp
Length : 813 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCCACCACTCCCCCGAGATCCGGGCCGAGGCCGTGACGTGGTCGGTGGACGGCACCACGATCCTCGACGGCGTCAG
CTGCCACGCGCCCTCCCGACGGATCACCGGGCTCATCGGGCCGAACGGCTCCGGCAAGACGTCGCTGCTGTCCGCGATGG
CCCGCCTCACCCGCCCCGACTCCGGGCGGGTGATGGTCGGCGACGAACCCGCAGCCGAGATCGACCGCCGCGAGTTCGCC
CGCACGGTGGCCCTCGTGGAGCAGCATTCGGCGACCGAACTGGAGTTGACCGTCGAACAGATCGTCGAACTCGGCATGAT
TCCGCACCGTGGCGGGTGGGCCCGGCCGGCCGCCGCCGGGACGGCCGACATCGTCACCGAGAGCCTGGCGATGGCCGGGA
TCACCGCCCTGCGACACCGCCTGTGGCAGAGCCTGTCCGGCGGCGAGAAACAGAAGACCCAACTGGCACGGGCGTTTGCG
CAACGTCCCTGTGTGGTGCTGCTCGACGAGCCCACCAACCACCTCGACGTCTCCGCGTCGCTCGAACTGCTCGACCTGAT
TCGCGCGCGCGGCCTCACCACCGTCGCCGCGATGCACGACCTGAACCTCGCCGCCATGTACTGCGATCACCTCGTGGTCC
TGGACCGCGGCCGCGTCGTCACCGAGGGCACCCCCGAAAGTGTCCTCACCGAACAGTTGCTCGCCGACGTCTACGGCATC
GACGCGATCGTCCAGCCGCATCCACGCACCGGACGCCCCATGGTGGTGTTGTGCGGCACGACCGGGGCCGAAATCGAAAG
GCTTTCCTCATGA

Protein sequence : 
MSHHSPEIRAEAVTWSVDGTTILDGVSCHAPSRRITGLIGPNGSGKTSLLSAMARLTRPDSGRVMVGDEPAAEIDRREFA
RTVALVEQHSATELELTVEQIVELGMIPHRGGWARPAAAGTADIVTESLAMAGITALRHRLWQSLSGGEKQKTQLARAFA
QRPCVVLLDEPTNHLDVSASLELLDLIRARGLTTVAAMHDLNLAAMYCDHLVVLDRGRVVTEGTPESVLTEQLLADVYGI
DAIVQPHPRTGRPMVVLCGTTGAEIERLSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-40 42
irp6C NP_938506.1 ATP-binding protein Irp6C Not tested Not named Protein 4e-27 42
irp6C YP_005124377.1 ATP-binding protein Irp6C Virulence Not named Protein 8e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
REQ_08030 YP_004005603.1 ABC transporter ATPase BAC0164 Protein 7e-41 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
REQ_08030 YP_004005603.1 ABC transporter ATPase VFG1042 Protein 6e-41 42