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Name : REQ_06020 (REQ_06020) Accession : YP_004005406.1 Strain : Rhodococcus equi 103S Genome accession: NC_014659 Putative virulence/resistance : Virulence Product : DNA binding ATP-dependent peptidase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 631524 - 634079 bp Length : 2556 bp Strand : + Note : - DNA sequence : ATGTTCGAGAGGTTCACCGATCGCGCGCGGCGCGTCGTCGTCCTGGCTCAAGAAGAAGCCAGGATGCTCAACCACAACTA CATCGGCACGGAACACATCCTGCTGGGTCTCATCCACGAGGGTGAAGGCGTGGCGGCGAAGTCGCTGGAGTCGTTGGGTA TCTCCCTCGAAGGTGTCCGCAGCCAGGTAGAGGAGATCATCGGCCAGGGTCAGCAGGCCCCGTCCGGACACATCCCCTTC ACTCCGCGTGCCAAGAAGGTCCTCGAGCTCAGCCTCCGTGAGGCGCTGCAGCTCGGCCACAACTACATCGGCACCGAGCA CATCCTGCTCGGCCTGATCCGCGAGGGTGAGGGCGTCGCCGCCCAGGTCCTCGTGAAGCTGGGTGCCGACCTCAACCGTG TCCGCCAGCAGGTCATCCAGCTGCTGTCGGGTTACCAGGGCAAGGAGCCGGCCGAGGCCGGCGGCAGCCGCGGCGAGGCG GGTACCCCGTCGACGTCGCTGGTCCTCGACCAGTTCGGCCGCAACCTCACCCAGGCCGCCCTGGAAGGCAAGCTCGACCC CGTCATCGGCCGCTCAAAGGAGATCGAGCGCGTCATGCAGGTGCTGAGCCGCCGTACCAAGAACAACCCTGTCCTGATCG GTGAGCCGGGCGTCGGCAAGACCGCGGTCGTCGAGGGCCTCGCGCAGGCCATCGTCAACGGCGAGGTCCCGGAGACCCTC AAGGACAAGCAGCTGTACACGCTGGACCTGGGTTCGCTGGTTGCCGGCAGCCGCTACCGCGGTGACTTCGAGGAGCGCCT GAAGAAGGTCCTCAAGGAGATCAACACCCGCGGCGACATCATCCTGTTCATCGACGAGCTGCACACGCTGGTCGGTGCGG GCGCGGCCGAGGGCGCTATCGACGCGGCCTCGATCCTCAAGCCGAAGCTGGCCCGCGGTGAGCTGCAGACCATCGGTGCC ACCACCCTCGACGAGTACCGCAAGTACATCGAGAAGGATGCCGCCCTCGAGCGCCGGTTCCAGCCGGTGCAGGTCGGTGA GCCGACGGTCGAGCACACCATCGAGATCCTCAAGGGTCTGCGCGACCGCTACGAGGCGCACCACCGCGTCTCGATCACCG ACAGCGCGCTGGTCGCGGCGGCCACCCTGGCCGACCGCTACATCAACGACCGCTTCCTGCCGGACAAGGCCATCGACCTC ATCGACGAGGCCGGCGCCCGAATGCGCATCCGCCGGATGACCGCACCGCCGGACCTGCGCGAGTTCGACGACAAGATCGC CGACGCCCGCCGCGAGAAGGAGTCCGCGATCGACGCGCAGGACTTCGAGAAGGCCGCGAACCTCCGCGACAAGGAGAAGA CCCTCGTCGCGCAGCGTGCCGAGCGGGAGAAGCAGTGGCGTTCGGGTGATCTGGATGTCATCGCCGAGGTCGACGACGAG CAGATCGCCGAGGTGCTGGGCAACTGGACCGGCATCCCGGTCTTCAAGCTCACCGAGGAGGAGACCACGCGTCTGCTCCG TATGGAGGAGGAGCTGCACAAGCGGATCATCGGCCAGGAGGACGCCGTCAAGGCCGTCTCCAAGGCGATCCGTCGTACCC GCGCCGGCCTGAAGGATCCGAAGCGTCCGTCGGGCTCGTTCATCTTCGCCGGCCCGTCCGGTGTCGGTAAGACCGAGCTG TCCAAGGCGCTCGCGAACTTCCTGTTCGGCGAGGACGATGCCCTCATCCAGATCGACATGGGCGAGTTCCACGACCGGTT CACCGCGTCGCGTCTGTTCGGTGCCCCTCCCGGCTACGTCGGCTACGAAGAGGGCGGCCAGCTCACCGAGAAGGTGCGCC GCAAGCCGTTCTCGGTGGTCCTGTTCGACGAGATCGAGAAGGCACACCAGGAGATCTACAACACCCTCCTGCAGGTGCTC GAGGACGGCCGTCTCACCGACGGTCAGGGTCGTACGGTCGACTTCAAGAACACCGTGCTGATCTTCACCTCGAACCTCGG TACCTCGGACATCTCCAAGGCCGTGGGTCTGGGCTTCTCGGCGGGAACGGGCAGCGAGTCGAACTACGAGCGCATGAAGC TCAAGGTTCACGACGAGCTCAAGAAGCACTTCCGCCCCGAGTTCCTCAACCGTATCGACGACATCATCGTCTTCCACCAG CTCTCGCAGAACGAGATCATCGAGATGGTGGACCTGATGATCGGTCGCGTCGAGGCGCAGCTGAAGAACAAGGACATGGA CATCGAGCTGACCGAGCAGGCCAAGTCGCTGCTCGCGAAGCGCGGCTTCGATCCCGTCCTGGGTGCGCGACCGCTGCGTC GCACCATCCAGCGCGAGATCGAGGACCAGCTGTCGGAGAAGATCCTCTTCAACGAACTGGGCCCGGGCCAGATCGTCCTG GTCGACGTCGAGGGCTGGGACGGCGAGGGCGCCGGCGAGAACGCGAAGTTCACGTTCCACGGATCCCCGAAGCCGGTCAA GGTTCCGGACTCGCCTGCCGAGGCGCTGGCCGGTGCCGGTGACTCCACCCCCTCCGAGGGCGGTTCGGCCGAGTAG Protein sequence : MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQAPSGHIPF TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKEPAEAGGSRGEA GTPSTSLVLDQFGRNLTQAALEGKLDPVIGRSKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPETL KDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGA TTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDSALVAAATLADRYINDRFLPDKAIDL IDEAGARMRIRRMTAPPDLREFDDKIADARREKESAIDAQDFEKAANLRDKEKTLVAQRAEREKQWRSGDLDVIAEVDDE QIAEVLGNWTGIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTEL SKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVL EDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKAVGLGFSAGTGSESNYERMKLKVHDELKKHFRPEFLNRIDDIIVFHQ LSQNEIIEMVDLMIGRVEAQLKNKDMDIELTEQAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFNELGPGQIVL VDVEGWDGEGAGENAKFTFHGSPKPVKVPDSPAEALAGAGDSTPSEGGSAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 82 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| REQ_06020 | YP_004005406.1 | DNA binding ATP-dependent peptidase | VFG0079 | Protein | 0.0 | 61 |
| REQ_06020 | YP_004005406.1 | DNA binding ATP-dependent peptidase | VFG0080 | Protein | 1e-144 | 51 |
