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Name : REQ_05330 (REQ_05330) Accession : YP_004005342.1 Strain : Rhodococcus equi 103S Genome accession: NC_014659 Putative virulence/resistance : Unknown Product : oligopeptide/dipeptide ABC transporter ATPase Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 557446 - 559056 bp Length : 1611 bp Strand : + Note : - DNA sequence : GTGACCGCGCCGCTGCTCGAGTTGGACGGGCTCGAGGTGACCTTCGGCACCGGTACCGGCGCGGTGCGTGCGCTTCGCGG CGTGGATCTCACGGTGCAGCGCGGCCAGACCGTCGCGATCGTCGGCGAGTCCGGTTCGGGCAAGTCGACCCTCGCGCACG CGCTCGTCGGGCTGCTGCCGGGCGCAGGCCGGGTGACGGGCGGCCGCATCACGTTCGAAGGGCGCGACCTGGCACACGCG TCGGAGCGAATCTTCGTCGGAATTCGGGGGAGCGGAATCGGGTTCGTGCCGCAGGACCCCGCGACCAATCTCGACCCCGT CTGGAAGATCGGGTACCAGGTGCGCGAGACGCTCGCCGCCAACGGGATCGCGAAGGGGCGGGCGGCCCACCGCCGCGCGG CCGAACTGCTCGCGCAGGCGGGTCTGGACGACGCCGAGGCCCGCGCCGGGCGCTACCCACACGAATTCTCGGGTGGTATG CGTCAGCGGGTCCTCATCGCGATCGGGTTGGCCGCCCGGCCACGACTGCTGATCGCCGACGAACCGACGTCGGCGCTGGA CGTGACCGTCCAGCAGCGCGTACTCGACCATCTCGAACGCCTGACCGACGAACTCGGGACTGCACTGCTGCTCATCACGC ACGATCTCGGGGTCGCTGCCGAGCGTGCCGAACACGTCGTCGTGATGCACGCCGGTGCCGTCGTCGAATCCGGCTCGCCG GCGCAGATTCTCACCGCGCCCGAACATCCGTACACTCGCCGGCTCGTCGCGGCGGCGCCGTCGCTCGGGGCCGCCCGGAC CCGGCAACCTCCGAACGCGCCGGCCGGCGCGCATCCACTCCTCGTCGTCGACGGCCTGCGAAAGCTGTTCCACAGCAGAC GCGCCGAGGTCATCGCCGTCGACGACGTCTCGTTCACCGTCGACCGCGGCACCACCACCGCGATCGTCGGCGAATCGGGT TCGGGTAAGACGACGGTGTCGCGGATGATCCTGGGGTTGCTGCCTCCCGACGGCGGCTCGGTCCTGTTCGACGGCACCGA TCCGGCGGCACTCGGACGCCGCGAGAAGGAGTTCCGACGCCGCGTCCAACCCGTGTTCCAGGACCCCTACGGCAGCCTCG ACCCGACGTACTCGGTGTTCCGGATCGTCGAGGAACCGATGCGGGTGCATCGGATCGGTGATCGCGGCGAGCGTGCGAGG CGGGTGCGTGAACTTCTCGAGCGCGTCGCACTGCCCGCCGATCTGTCCCGTCGCTTCCCGGCCGAGTTGTCCGGCGGGCA GCGGCAGCGGGTGGCGATCGCCCGGGCGCTCGCTCTGGCACCCGAACTGCTGGTGTGCGACGAGGCGGTCTCCGCTCTCG ACGTCGTCGTACAGGACCAGATCCTGCGTCTGCTCGACGAACTGCAGCGCGACCTGGGGCTGACGTACGTCTTCGTCAGC CACGACCTGGCCGTGGTCCGGCGGATCGCCGACCGCGTCGTGGTGATGCACGGCGGCCGAGTGGTGGAGGAAGCGGCCGC GGAGGGCGTGTTCGAGCACCCCGGACACGAGTACACCCGGCGCCTGCTCGACGCCGTACCGGCCGGGCGCCGGCGCCGCA GAGACGGGTAG Protein sequence : MTAPLLELDGLEVTFGTGTGAVRALRGVDLTVQRGQTVAIVGESGSGKSTLAHALVGLLPGAGRVTGGRITFEGRDLAHA SERIFVGIRGSGIGFVPQDPATNLDPVWKIGYQVRETLAANGIAKGRAAHRRAAELLAQAGLDDAEARAGRYPHEFSGGM RQRVLIAIGLAARPRLLIADEPTSALDVTVQQRVLDHLERLTDELGTALLLITHDLGVAAERAEHVVVMHAGAVVESGSP AQILTAPEHPYTRRLVAAAPSLGAARTRQPPNAPAGAHPLLVVDGLRKLFHSRRAEVIAVDDVSFTVDRGTTTAIVGESG SGKTTVSRMILGLLPPDGGSVLFDGTDPAALGRREKEFRRRVQPVFQDPYGSLDPTYSVFRIVEEPMRVHRIGDRGERAR RVRELLERVALPADLSRRFPAELSGGQRQRVAIARALALAPELLVCDEAVSALDVVVQDQILRLLDELQRDLGLTYVFVS HDLAVVRRIADRVVVMHGGRVVEEAAAEGVFEHPGHEYTRRLLDAVPAGRRRRRDG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-134 | 58 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-63 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-63 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-63 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-63 | 42 |
