Gene Information

Name : REQ_47030 (REQ_47030)
Accession : YP_004009321.1
Strain : Rhodococcus equi 103S
Genome accession: NC_014659
Putative virulence/resistance : Virulence
Product : ABC transporter ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4604
EC number : -
Position : 4998521 - 4999276 bp
Length : 756 bp
Strand : +
Note : -

DNA sequence : 
GTGATCGAGATCAAGGGCATCCGCAAGGACTACAGCCGAGCGGTGACGATCGGCCCGATCGACCTCCGGATCCCGGCGGG
CGGCATCACCGCACTCGTCGGCCCCAACGGCGCCGGCAAGTCGACGCTGCTCACGATGATCGGACGACTGCTGAGTCCGG
ACGCGGGCAGCATCGAGATCGGCGGCCACGACGTGACGCGCACGCGCTCGAAGGATCTCGCCAAGATCGTCTCGATCCTG
CGGCAGGAGAACCACTTCGTCACCCGACTCACGGTGCGCCAACTCGTCGGGTTCGGCCGGTTCCCGCACACCAAAGGCCG
GCTCACCCGCGTCGACGAGGAGGCGGTCACCCGGGCGATCGACTTCTTCGGCCTCACCGAACTCGAGGGCCGGTACCTCG
ACCAACTGTCCGGCGGGCAGCGTCAGCGCGCCTACGTGGCGATGGTGCTGTGCCAGGAAACCGACTACATCCTGCTCGAC
GAGCCGCTCAACAACCTCGACATGAAGCACTCGGTGCAGATGATGAAGCACCTGCGGAAGGTGGCCGACGAACTCGGACG
CACCGTGGTGATCGTGCTGCACGACATCAACTTCGCCGCGCACTACGCAGACCGGATCTGCGCGATGAAGGACGGCCAGG
TGGTCGAATTCGGCACGCCGACAGAAATTTTGGTCGACGAGACGCTGGGCCGGGTCTTCGACACCCCGGTCTCGTGCATG
CCCGGCCCGAACGGCCCGATCGCCGTCTACTACTGA

Protein sequence : 
MIEIKGIRKDYSRAVTIGPIDLRIPAGGITALVGPNGAGKSTLLTMIGRLLSPDAGSIEIGGHDVTRTRSKDLAKIVSIL
RQENHFVTRLTVRQLVGFGRFPHTKGRLTRVDEEAVTRAIDFFGLTELEGRYLDQLSGGQRQRAYVAMVLCQETDYILLD
EPLNNLDMKHSVQMMKHLRKVADELGRTVVIVLHDINFAAHYADRICAMKDGQVVEFGTPTEILVDETLGRVFDTPVSCM
PGPNGPIAVYY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-35 41
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-36 41
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-36 41
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-36 41
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
REQ_47030 YP_004009321.1 ABC transporter ATPase BAC0164 Protein 8e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
REQ_47030 YP_004009321.1 ABC transporter ATPase VFG1042 Protein 7e-36 41