Gene Information

Name : REQ_45220 (REQ_45220)
Accession : YP_004009159.1
Strain : Rhodococcus equi 103S
Genome accession: NC_014659
Putative virulence/resistance : Virulence
Product : two component system response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4813666 - 4814358 bp
Length : 693 bp
Strand : +
Note : -

DNA sequence : 
ATGGGCGTCATGACTGCGGTGTTGCTGATCGAGGACGACGACAACCTGCGCGACGCGCTGAGCCTCGCGCTGCACCGCTA
CGGACACGTGGTGACGGCGGCGGCCAGCGGTGAGGCCGGACTGGCGGCGCTCGCCGACGGCGCGCCCGACATCGTCGTGC
TGGACGTGATGCTGCCGGGCGTCGACGGGTTCGAGGTGTGCCGGCGGATCCGGGCCCGCAGCGGTGTCCCCGTCATCATG
CTCACCGCACGCGGTGAGGACGTCGACGTCGTCTCGGGACTCGAGACCGGCGCCGACGACTACGTCGTCAAGCCGGTGCA
GCCGCGGATCCTCGACGCTCGTATCAAGGCGGTGCTGCGCCGAACCCCGACCGCGCCCACCGTGGACGGCCGCGAGGTGC
ACGGCGACCTCGTGATCGATCGCGACGCCCTGACGCTCACCGAGGGCGCTCGGCGGCCCGAACTCACCCGCACCGAATGG
CAACTGCTGCTGGCTCTGTCGGAGCGCCCCGGCCAGGTGCTCTCCCGCGAGCAACTGCTCGAGAAGGTGTGGGGCTTCGA
CCACCTCGGCGGCTCCCGTCTGGTCGACGCCTGTGTGCAGCGACTGCGCGCGAAGATCGAGAAGGAACCGTCGAATCCCC
GCTACGTGCAGACGGTGCGCGGATTCGGCTACCGGTTCGGTCCCGTCGCATGA

Protein sequence : 
MGVMTAVLLIEDDDNLRDALSLALHRYGHVVTAAASGEAGLAALADGAPDIVVLDVMLPGVDGFEVCRRIRARSGVPVIM
LTARGEDVDVVSGLETGADDYVVKPVQPRILDARIKAVLRRTPTAPTVDGREVHGDLVIDRDALTLTEGARRPELTRTEW
QLLLALSERPGQVLSREQLLEKVWGFDHLGGSRLVDACVQRLRAKIEKEPSNPRYVQTVRGFGYRFGPVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDB402_0209 YP_005126722.1 two-component system response regulator Not tested Not named Protein 2e-25 42
mprA YP_005684640.1 response regulator mprA Not tested PiCp 3 Protein 9e-25 41
mprA YP_005680459.1 response regulator mprA Not tested PiCp 3 Protein 9e-25 41
mprA YP_005682550.1 response regulator mprA Not tested PiCp 3 Protein 9e-25 41
tcsR1 YP_003782583.1 two-component system transcriptional regulatory protein Not tested PiCp 3 Protein 9e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
REQ_45220 YP_004009159.1 two component system response regulator AE000516.2.gene3505. Protein 2e-37 47
REQ_45220 YP_004009159.1 two component system response regulator NC_012469.1.7685629. Protein 1e-39 44
REQ_45220 YP_004009159.1 two component system response regulator AF162694.1.orf4.gene Protein 8e-26 42
REQ_45220 YP_004009159.1 two component system response regulator CP000675.2.gene1535. Protein 2e-31 41
REQ_45220 YP_004009159.1 two component system response regulator CP000034.1.gene3671. Protein 1e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
REQ_45220 YP_004009159.1 two component system response regulator VFG1389 Protein 5e-23 42