Gene Information

Name : REQ_36160 (REQ_36160)
Accession : YP_004008284.1
Strain : Rhodococcus equi 103S
Genome accession: NC_014659
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 3865534 - 3867057 bp
Length : 1524 bp
Strand : -
Note : -

DNA sequence :
ATGAGCGTGTACGCCCGCCCTGGTTCTCCCGATGCCCTGATGTCCTTCGAAACGCGCTACGACAACTGGATCGGCGGCGA
GTGGGTGGCTCCGGTGAAGGGGCAGTACTTCGAGAATCCGACACCGATCACGGGCCAGCCGTTCTGCGAGGTCGCCCGGT
CGACGGCCGAGGACATCGAACTCGCCCTCGACGCCGCACACGCCGCGGCGCCGGCATGGGGGAAGACGCCGGTCGCGCAG
CGAGCGCTCGTTCTGAACAGGATCGCCGACCGGATCGAGGCCAACCTCGAGAAGATCGCGCTCGCCGAGTCGTGGGACAA
CGGCAAGCCGATCCGGGAGACCCTGAACGCCGACATCCCGCTCGCGGTCGACCACTTCCGCTACTTCGCCGGTGCCATCC
GCGCGCAGGAGGGTGCGCTGTCGGAGATCGACACCGACACTGTCGCCTATCACTTCCACGAGCCGCTCGGCGTGGTGGGG
CAGATCATTCCGTGGAACTTCCCGATCCTCATGGCGACGTGGAAGCTCGCGCCCGCGCTCGCGGCGGGTAACGCCGTGGT
CCTCAAGCCGGCCGAGCAGACACCGGCGTCGGTGCTGTATCTGTTCTCGCTCATCGGCGACCTGCTGCCGCCCGGTGTCG
TCAACATCGTCAACGGTTTCGGTACCGAGGCCGGCAAGCCGCTCGCGTCGAGCCCGCGGATCAAGAAGATCGCGTTCACC
GGTGAGACCACGACCGGCCGGCTGATCATGCAGTACGCGTCGCAGAACCTCATCCCCGTCACGCTCGAACTCGGCGGCAA
GAGTCCCAACGTGTTCTTCTCCGACGTGCTCGCCGCGAACGACAGCTTCCAGGACAAGGCCCTCGAGGGTTTCACGATGT
TCGCGCTGAACCAGGGCGAGGTGTGCACGTGCCCGTCGCGCGCACTGATCCAGCGCGACATCTTCGACGACTTCCTCGCG
CTCGCCGCGGTGCGCACCAAGGCCGTTCGGCAGGGTGACCCGCTCGACACCGACACGATGATCGGTGCGCAGGCGTCGAA
CGACCAGCTCGAGAAGATCCTGTCGTACATCGAGATCGGGAAGAACGAGGGCGCCCGGGTCGTCACGGGCGGCGAGCGCG
CCGAGCTCGGCGGCGACCTGTCCGAGGGGTACTTCGTTCAGCCGACGATCTTCACCGGCACCAACGACATGCGGATCTTC
CAGGAGGAGATCTTCGGTCCGGTGGTCTCCGTGACGTCCTTCGCCGACTACGACGAGGCCATCGCGATCGCGAACGACAC
CCTCTACGGTCTCGGCGCCGGAGTGTGGTCGCGGGACGGCGGCGTCGCGTACCGGGCCGGACGCGACATCCAGGCGGGCC
GGGTGTGGACCAACACCTATCACCAGTACCCCGCGCACGCGGCGTTCGGCGGCTACAAGCAGTCCGGCATCGGGCGCGAG
AACCACCACATGATGCTCGATCACTACCAGCAGACGAAGAACCTGCTCGTCAGCTACGCGCCCGGCGCACAGGGCTTCTT
CTGA

Protein sequence :
MSVYARPGSPDALMSFETRYDNWIGGEWVAPVKGQYFENPTPITGQPFCEVARSTAEDIELALDAAHAAAPAWGKTPVAQ
RALVLNRIADRIEANLEKIALAESWDNGKPIRETLNADIPLAVDHFRYFAGAIRAQEGALSEIDTDTVAYHFHEPLGVVG
QIIPWNFPILMATWKLAPALAAGNAVVLKPAEQTPASVLYLFSLIGDLLPPGVVNIVNGFGTEAGKPLASSPRIKKIAFT
GETTTGRLIMQYASQNLIPVTLELGGKSPNVFFSDVLAANDSFQDKALEGFTMFALNQGEVCTCPSRALIQRDIFDDFLA
LAAVRTKAVRQGDPLDTDTMIGAQASNDQLEKILSYIEIGKNEGARVVTGGERAELGGDLSEGYFVQPTIFTGTNDMRIF
QEEIFGPVVSVTSFADYDEAIAIANDTLYGLGAGVWSRDGGVAYRAGRDIQAGRVWTNTYHQYPAHAAFGGYKQSGIGRE
NHHMMLDHYQQTKNLLVSYAPGAQGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-142 60
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-148 59
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-148 59
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-148 59
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-148 59
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-67 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
REQ_36160 YP_004008284.1 aldehyde dehydrogenase VFG0082 Protein 2e-142 60