Gene Information

Name : REQ_33730 (REQ_33730)
Accession : YP_004008048.1
Strain : Rhodococcus equi 103S
Genome accession: NC_014659
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3585058 - 3585813 bp
Length : 756 bp
Strand : -
Note : -

DNA sequence : 
ATGAGAATTGACGACCAGAAGGTGCGGGCTCGGGGCCTGACGAAGACGTATGGCAGCGGCGACACCGCGGTCCATGCACT
GCGCGGGGTGGACGTCGACTTCGGGGCCGGGATGTTCACCGCGATCATGGGACCCTCGGGCTCGGGTAAGTCGACGCTGA
TGCACTGCCTCGCCGGCCTGGACACCGCGACAGCCGGGACCGTCGAGGTAGGCGGCACCGAGATCACGACCCTGGGCGAC
CGCGCGCTCACGGAACTGCGACGGGATCGGATCGGCTTCGTGTTCCAGGCGTTCAACCTGCTGCCGGTGCTGTCGGCGGA
GGAGAACATGCTGCTGCCGATGCGGTTGGCGGGACGTCTGCCCGAGCCGGGATGGCGCGACGAGGTGGTGCGGCGACTGG
GGTTGACCGACCGGCTCGGACACCGCCCACACGAGTTGTCGGGCGGGCAGCAGCAGCGGGTCGCGGTGGCGAGGGCTCTG
CTACCGCAGCCCGACGTGATCTTCGCGGACGAGCCCACCGGCAATCTCGATTCCCGCACCGGCGCGGAGGTTCTGGACCT
GTTGCGCTCGAGTGTGCGCGAGACGGGTCAGACCGTGGTGATGGTGACACACGATCCGGTCGCGGCGTCCTACGCGGATC
GGGTGGTGCTGATCGCCGACGGCCGGATCGCCGGTGAGATCGACCGTCCCACCACCGATTCGGTGATCGAGACGATGCGC
CTGCTCGGTGCCGACGACGTCAGCAGGACGCACTGA

Protein sequence : 
MRIDDQKVRARGLTKTYGSGDTAVHALRGVDVDFGAGMFTAIMGPSGSGKSTLMHCLAGLDTATAGTVEVGGTEITTLGD
RALTELRRDRIGFVFQAFNLLPVLSAEENMLLPMRLAGRLPEPGWRDEVVRRLGLTDRLGHRPHELSGGQQQRVAVARAL
LPQPDVIFADEPTGNLDSRTGAEVLDLLRSSVRETGQTVVMVTHDPVAASYADRVVLIADGRIAGEIDRPTTDSVIETMR
LLGADDVSRTH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-37 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-40 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-40 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-40 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
REQ_33730 YP_004008048.1 ABC transporter ATPase NC_008702.1.4606598. Protein 1e-35 49
REQ_33730 YP_004008048.1 ABC transporter ATPase CP001581.1.gene798.p Protein 8e-40 46
REQ_33730 YP_004008048.1 ABC transporter ATPase CP001581.1.gene598.p Protein 7e-43 45
REQ_33730 YP_004008048.1 ABC transporter ATPase NC_012469.1.7686878. Protein 3e-40 44
REQ_33730 YP_004008048.1 ABC transporter ATPase NC_012469.1.7685735. Protein 3e-29 41