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Name : REQ_02920 (REQ_02920) Accession : YP_004005122.1 Strain : Rhodococcus equi 103S Genome accession: NC_014659 Putative virulence/resistance : Virulence Product : DNA binding ATP-dependent peptidase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 317144 - 319624 bp Length : 2481 bp Strand : - Note : - DNA sequence : ATGACCGAAGGTTGGGGACGCATGGACAGTCCCTTCGACGACATTTTCGCGAGGTTCTTCGGATCGGGACTGTCGTCCCA GCCCCCGGTGCAGCGCGTCGATCTCGGGCGGTTGCTCAACGACGACGCCCGGCGCCTCATCGCCACCGCGCGCGACGCGG CGAGCGAATGGGGGAACAGTGAGATCACCCCCGAGCACCTGCTGTACGCGGCGGCGCAGAACGATCCGACGCGTGGCGTG CTCAGCAGCATCAATCTGGACCCGGACGAGTTGGCGTCGAAGATGGCCGCGCACCTGGACAAGCACGGCACACCGAAGAC GACACCCGGTGCACCCAGCCTCAGTCCGGCGGCCAAGCTCGCACTCCGGACGGCGCAGCAGCAGGCCAGCGAATCGGGCA GCAGCTACATCGGCCCCGAGCACATCCTGATCGGCATCGCCGCGAACTCCGAGAGCCCCGCCGGCAAGGCGCTGCTCGGC GCCACCATCGAAGGCGAGAAGTCGTCGGCGCCGCCGAGTTCCACGCCGACGCTCGACGAGTACGGCCGCGACCTCACCGC CGAGGCCCGCGCCGGCAACGTCGACCCCGTGGTGGGGCGCGCCAAGGAGGTGGAGCAGACCATCGAGATCCTGTCCCGCC GCCGCAAGAACAATCCGGTCCTCATCGGCGATCCCGGTGTCGGCAAGACCGCGATCGTGGAAGGTCTCGCGCAGCGCATC GTCAACGGCGACGTGCCGTCGACGCTCACCGACCGACGCGTCGTGGCGCTTGACGTCGGCTCGCTCGTCGCGGGCACCAA GTACCGCGGTGAATTCGAGGAGCGGTTGACGAAGATTCTCGACGAGGTCAAGGCGCACTCGGACGAACTGGTGCTGTTCA TCGACGAGCTGCACACCATCGTCGGCGCCGGAGCGGGCGGCGAGGGTGCGATGGATGCCGGCAATCTACTCAAGCCGGCG CTGGCCCGCGGTGAGCTGCACGCCATCGGCGCCACCACCATCGACGAGTACCGCAAACACATCGAGAAGGACGCCGCGCT CGAACGCCGTTTCCAGCCGGTGCTGGTCGCGGAGCCGTCGGTGGACGACACCATCGAGATCCTGCGCGGTCTCGTCGACA GCTACGAGGCGCACCACCAGGTGCACTACACCGACGAGGCGCTCGTCGCGGCGGCCGAACTGTCCGACCGCTACATCACC GACCGGTTCATGCCCGACAAGGCAATCGACCTCGTCGACCAGGCCGGGGCCCGCGTGCGGCTGCGCACCCGCACGCCCGA CGTCGACACCCGTGCCGCGGAGGAGGAGATCGCCCGCCTCAAGCGGGAGAAGGACTCCGCCGTCGGGCAGGAGGACTACG AGCGCGCCAACGCCCTCAAGCGGCAGATCACCGAGGCCGAGGAACGCCTGGGCGAGACGGCGGAGGAGACCACCCCGGAG GTGACCGTCGAAGACATCGCGCACGTCGTGTCGCGGCAGACCGGAATCCCGGTGGCAGACCTGACGTCGGAGGAACGCGA GCGGCTCATGAAGCTCGAGGACGTCCTGCACGCCCGGGTGATCGGGCAGAACGAGGCCGTCACCGCGGTGGCGGAGGCGG TACGTCGGTCCCGGGCCGGGCTGTCCGACCCGAACCGTCCCATCGGCTCGTTCCTGTTCCTCGGACCCACCGGTGTCGGC AAGACCGAGACCGCGAAAGCGTTGGCGGAGGCCGTGTTCGGCGACGAGGGCCGGATGATCCGGTTCGACATGAGCGAGTT CCAGGAGAAGCACACCGTCTCCCGCCTCGTCGGCGCCCCGCCCGGGTACGTCGGCTACGAGGAGGCCGGTCAGCTCACCG ACAAGGTGCGGCGGCAGCCGTATTCGGTGGTGCTGTTCGACGAGGTCGAGAAGGCCCATCCGGACGTGTTCAACGTGCTG CTGCAGCTGCTCGACGACGGCCGCGTCACCGACGCGCAGGGCCGCACCGTCGACTTCAAGAACACCATCGTGATCCTCAC CAGCAACATCGGCTCCGATCTGATCCTCGGCGCGAAGGGTGAGGACGTCGAAGACCTGGTGCCGACGCTGATGGAGCGGC TGCGGGCGCACTTCCGGCCCGAGTTCCTCAACCGGATCGACGAGACCATCGTCTTCCACCGGCTCGACCAGACCGAGCTG CGGCAGATCATCGAGCTCATCCTCGACGGCACCCGCCGCCAGCTGCACGCGCAGAACGTCGAACTCGACATCACCGAGGA GGCCGTCGACTGGCTGGCCGACAAGGGCTACCAGCCGGAGTTCGGCGCCCGGCCACTACGGCGGACCATCCAGAAGGAGC TCGACAACCGGCTCGCCGGGCTGCTGCTGTCCGGCGAACTCGAACCGGAGGACATCGTGAGGGTGTCCGCGAACGGCGGC CTCGAGCTCGGCGTCGTGCATCCCGGCAAGGGTGAGGGCTCGTTGCCGACCGAACCGGAGAAGGCGTCGTCGGAGACCTG A Protein sequence : MTEGWGRMDSPFDDIFARFFGSGLSSQPPVQRVDLGRLLNDDARRLIATARDAASEWGNSEITPEHLLYAAAQNDPTRGV LSSINLDPDELASKMAAHLDKHGTPKTTPGAPSLSPAAKLALRTAQQQASESGSSYIGPEHILIGIAANSESPAGKALLG ATIEGEKSSAPPSSTPTLDEYGRDLTAEARAGNVDPVVGRAKEVEQTIEILSRRRKNNPVLIGDPGVGKTAIVEGLAQRI VNGDVPSTLTDRRVVALDVGSLVAGTKYRGEFEERLTKILDEVKAHSDELVLFIDELHTIVGAGAGGEGAMDAGNLLKPA LARGELHAIGATTIDEYRKHIEKDAALERRFQPVLVAEPSVDDTIEILRGLVDSYEAHHQVHYTDEALVAAAELSDRYIT DRFMPDKAIDLVDQAGARVRLRTRTPDVDTRAAEEEIARLKREKDSAVGQEDYERANALKRQITEAEERLGETAEETTPE VTVEDIAHVVSRQTGIPVADLTSEERERLMKLEDVLHARVIGQNEAVTAVAEAVRRSRAGLSDPNRPIGSFLFLGPTGVG KTETAKALAEAVFGDEGRMIRFDMSEFQEKHTVSRLVGAPPGYVGYEEAGQLTDKVRRQPYSVVLFDEVEKAHPDVFNVL LQLLDDGRVTDAQGRTVDFKNTIVILTSNIGSDLILGAKGEDVEDLVPTLMERLRAHFRPEFLNRIDETIVFHRLDQTEL RQIIELILDGTRRQLHAQNVELDITEEAVDWLADKGYQPEFGARPLRRTIQKELDNRLAGLLLSGELEPEDIVRVSANGG LELGVVHPGKGEGSLPTEPEKASSET |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 5e-163 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| REQ_02920 | YP_004005122.1 | DNA binding ATP-dependent peptidase | VFG0079 | Protein | 6e-173 | 53 |
| REQ_02920 | YP_004005122.1 | DNA binding ATP-dependent peptidase | VFG0080 | Protein | 5e-147 | 52 |
