|
Name : iupC (REQ_24100) Accession : YP_004007136.1 Strain : Rhodococcus equi 103S Genome accession: NC_014659 Putative virulence/resistance : Virulence Product : ABC transporter ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1120 EC number : - Position : 2563932 - 2564780 bp Length : 849 bp Strand : + Note : - DNA sequence : ATGACCACCACGGCTCACCCCGCTCCCGCGCCGCGCCTCGTCGCCGAGAACCTCACCCTCGGCTACGGCGACCGGGTGAT CGTCGAGGGACTCGACGTCGAGATCCCCAGCGGCGTCATCACGACCGTCATCGGCCCCAACGGCTGCGGCAAGTCGACGA TGCTCCGCGCGCTCGGCCGCCTCCTCAAGCCGCGCTCGGGCACGGTCCTGCTCGACGGCAAGGCCATCACGACCATGCGC ACCAAGGACGTGGCCCGCACGCTCGGCATGCTGCCGCAGGCCCCCGTCGCCCCCGAGGGGCTCACCGTCGCCGACCTCGT CGCCCGGGGCCGGCACCCGCACCAGTCGTGGATCCGGCAGTGGTCGTCCGACGACGAGACCGAGGTCGCGCACGCGCTGG CCCTCACCGGCGTCGCCGACCTCGCGGACCGTCCCGTCGACCAGCTGTCCGGCGGCCAGCGCCAGCGAGCCTGGATTTCG ATGGCGCTCGCGCAGGGAACCGACATCCTGCTGCTCGACGAGCCCACCACCTACCTCGATCTGTCGCACTCGGTGGAGGT ACTCGACCTGGTCGACCGGATGCACGAGGAGATGGGCCGCACCGTGATCATGGTGCTCCACGATCTCAACCTCGCCGTCC GCTACAGCGATCATCTGATCGTCATGTCCGAAGGCCGGATCGTCGCGTCCGGCAAGCCGCAGGACGTCATCTCCGCCGAA CTCCTCGCGGACGTCTTCGGGCTCGAGGCCACCGTCATCGACGACCCGGTCTCGGATCGTCCGCTGATCGTCCCGATCGG TACCCGGCACGTGTACGGCGCGGTGGGCGGCCCGCACCGCGAACGGTGA Protein sequence : MTTTAHPAPAPRLVAENLTLGYGDRVIVEGLDVEIPSGVITTVIGPNGCGKSTMLRALGRLLKPRSGTVLLDGKAITTMR TKDVARTLGMLPQAPVAPEGLTVADLVARGRHPHQSWIRQWSSDDETEVAHALALTGVADLADRPVDQLSGGQRQRAWIS MALAQGTDILLLDEPTTYLDLSHSVEVLDLVDRMHEEMGRTVIMVLHDLNLAVRYSDHLIVMSEGRIVASGKPQDVISAE LLADVFGLEATVIDDPVSDRPLIVPIGTRHVYGAVGGPHRER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| iusE | YP_005143742.1 | iron ABC transporter ATP-binding protein | Virulence | Not named | Protein | 7e-75 | 55 |
| SPN23F_09560 | YP_002510939.1 | ferric siderophore ABC transporter ATP-binding protein | Virulence | PPI-1 | Protein | 2e-68 | 49 |
| SP_1035 | NP_345510.1 | iron-compound ABC transporter ATP-binding protein | Not tested | PPI-1 | Protein | 2e-68 | 49 |
| fagC | YP_005680307.1 | ATP binding cytoplasmic membrane protein | Not tested | PiCp 1 | Protein | 1e-64 | 47 |
| fagC | YP_003782430.1 | ABC transporter ATP-binding protein | Not tested | PiCp 1 | Protein | 1e-64 | 47 |
| fagC | YP_005682397.1 | ATP binding cytoplasmic membrane protein | Virulence | PiCp 1 | Protein | 1e-64 | 47 |
| fagC | YP_005684488.1 | ATP binding cytoplasmic membrane protein | Not tested | PiCp 1 | Protein | 1e-64 | 47 |
| fecE | AAL08451.1 | ATP-binding protein FecE | Virulence | SRL | Protein | 7e-58 | 46 |
| DIP0585 | NP_938961.1 | iron ABC transporter ATP-binding protein | Virulence | Not named | Protein | 6e-55 | 42 |
| ciuD | YP_005683346.1 | Iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 3e-54 | 41 |
| ciuD | YP_003783391.1 | iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 3e-54 | 41 |
| ciuD | YP_005685432.1 | Iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 3e-54 | 41 |
| ciuD | YP_005681255.1 | Iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 3e-54 | 41 |
| CDCE8392_1767 | YP_005134301.1 | iron complex transport system ATP-binding protein | Virulence | Not named | Protein | 1e-37 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| iupC | YP_004007136.1 | ABC transporter ATPase | BAC0164 | Protein | 4e-58 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| iupC | YP_004007136.1 | ABC transporter ATPase | VFG0925 | Protein | 5e-69 | 53 |
| iupC | YP_004007136.1 | ABC transporter ATPase | VFG1042 | Protein | 4e-58 | 46 |
