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Name : REQ_21420 (REQ_21420) Accession : YP_004006879.1 Strain : Rhodococcus equi 103S Genome accession: NC_014659 Putative virulence/resistance : Unknown Product : oligopeptide/dipeptide ABC transporter ATPase Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 2258969 - 2260603 bp Length : 1635 bp Strand : - Note : - DNA sequence : GTGACCACTCGACTACTCGACATCCGCGACCTGACGATCGCCTTCGGGGCGGCACGACCCGCCGTCGATTCCGCCTCCCT CGACGTCGACCGCGGCGAGATCGTGGCCCTGGTCGGCGAATCCGGCTCCGGCAAGTCCATGACCGCCCGCGCGATCCTCG GTCTCCTGCCCGACGGCGCGACTCCCCGGGGGTCGATCGTCCTCGACGGCGCTGAAATGATCGGTGTCCCCGACGCCGAC TTCGCCCGCGTGCGGGGCAACACGGTGTCGCTGATCTTCCAGGAGCCGCAGAGCGCGCTGAACCCCGTACGCCGCGTCGG CTGGCAGCTACGGGAGGCGATCCGCGCACACCGGAAGACATCGAGGGCAGGCGCCCGAGCGGCGGCAGTGGACCTGCTCC GGCAGGTGGAGATCCCCGACCCCGAGCGACGCGTGGACTACTACCCGCACCAACTCTCCGGGGGGCAGAAGCAACGGGTC GCGATCGCGCTCGCCCTGGCGGGCGAACCCGATCTGCTCGTCGCCGACGAGCCCACCACAGCCCTCGACGTCACGGTCCA GGCCGAGATCCTGGCGGTGCTCGACCGCCTGCGCACCCGAACCGGCATGGGCATCCTGCTCATCACTCACAACATGGGTG TCGTGGCGCAGCACGCCGACCGTGTCGTCGTCATGCGCGCCGGCCGGGTCGTCGAAACGGGCAGTGTGCACGCGGTGTTC GACGCCCCGACACACCCGTACACCCGATCCCTGCTGGCGGCGGTTCCGCGACTGCCCGAGGAGGCGGCCGTAACGCCGCC TCCGACGTCCGGTGCCGATGTCGTGCTCGAGTTCGACGCGGCCACGGTCACGTACCCGGCACGGCACGGAAGTCCCGCCT TCCGTGCCGTCGACCAGGTGAGCCTCACGGTCCGCCGCGGCGAAGTTCTCGGGCTCGTGGGGGAATCAGGTTCCGGCAAG ACCACCCTCGGGCGGGCCGCGGTGGGACTCGTACCGCTCACCGGGGGCCGGGTGCTGGTCGAAGGGCTCGATCTGGGCGA GATCACCGCCCGGCATCTCCGCGAACTGCGGCGCGACGTGGCGTTCGTCCAGCAGGATCCCGCGACCTCCCTCGATCCCC GGCTGACGATCGGCGCAAGTGTTCGCGAGCCGCTCGACGTGCACGGCGTCGGCTCCGCGGCCGACCGCCGCCGTCGCGTG CTCGAACTCCTCGACGCCGTCCGGTTGCCCGCCGCCTTCGCCGACCGCCTCCCGCACCAACTCTCGGGTGGACAGCGCCA GCGGATCGCGCTGGCCCGCGCTCTCGCGCTTCGGCCGAAGCTGCTCATCGCGGACGAACCGACGAGCGCTCTCGACGTGT CCGTGCAGGCCGAGGTGCTCGAATTGTTCACCGCGATCCAGCAGGACCTGGGGTTCGCATGCCTGTTCGTCAGCCACGAC TTGGCGGTGGTCCACCAGGTCGCCGATCGGGTCGCGGTCCTGCGGTCCGGGTCGGTGATCGAGGCGGGACCGGTGGATAC CGTGTTCACGACACCCCACGACCCCTACACCCGGGCACTGATCGACGCGGTGCCGTTGCCCGACCCGTCGCGTCGAGACG TCCGCTCCGCCGACCGTCAACCAGCCGCGGTGTGA Protein sequence : MTTRLLDIRDLTIAFGAARPAVDSASLDVDRGEIVALVGESGSGKSMTARAILGLLPDGATPRGSIVLDGAEMIGVPDAD FARVRGNTVSLIFQEPQSALNPVRRVGWQLREAIRAHRKTSRAGARAAAVDLLRQVEIPDPERRVDYYPHQLSGGQKQRV AIALALAGEPDLLVADEPTTALDVTVQAEILAVLDRLRTRTGMGILLITHNMGVVAQHADRVVVMRAGRVVETGSVHAVF DAPTHPYTRSLLAAVPRLPEEAAVTPPPTSGADVVLEFDAATVTYPARHGSPAFRAVDQVSLTVRRGEVLGLVGESGSGK TTLGRAAVGLVPLTGGRVLVEGLDLGEITARHLRELRRDVAFVQQDPATSLDPRLTIGASVREPLDVHGVGSAADRRRRV LELLDAVRLPAAFADRLPHQLSGGQRQRIALARALALRPKLLIADEPTSALDVSVQAEVLELFTAIQQDLGFACLFVSHD LAVVHQVADRVAVLRSGSVIEAGPVDTVFTTPHDPYTRALIDAVPLPDPSRRDVRSADRQPAAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-74 | 44 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-74 | 44 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 4e-74 | 44 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-74 | 44 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 3e-92 | 42 |
