Gene Information

Name : REQ_15940 (REQ_15940)
Accession : YP_004006356.1
Strain : Rhodococcus equi 103S
Genome accession: NC_014659
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1666317 - 1667087 bp
Length : 771 bp
Strand : -
Note : -

DNA sequence : 
ATGTCCTCCTTCGCTTCCAGCCCACCCTTCGTCGAGAGCCCGCCACGGGCCGCCGTCCGTCTCACCGACGTCACCCGAAC
GTACGGCTCGGGGCGCACCCGGGTCACCGCACTCGACGACGTCAGCCTCACCCTCGCGCCCGGCAGTTTCACTGCGATCA
TGGGCCCGTCCGGTTCGGGCAAGAGCACGTTTTTGCACTGTGCCGCCGGCCTCGACCAGCCCACCCGCGGCTCGGTGTGG
CTCGGCGACACCGAGATCAGTGCGCTGAAACCCAAGGCGCGCACCGTTTTCCGGCGGGATCACATGGGGTTCGTGTTCCA
GGCGTACAACCTCATGGCGGCGCTCACGGTCGAACAGAACGTGACGCTGCCGCTGTTGCTCGCCGGGCGCACCGCCGACC
GGGGGCATCTCGATCACGTCCTGGACGCGGTCGGACTCGCCGACAAGCGGCACCGCCGTCCGGCCGAGATGTCCGGTGGT
CAACAGCAGCGCGTTGCCATCGCGCGCGCGCTCATCACCCAGCCGCACGCGGTGTTCGCGGACGAGCCCACCGGGGCGCT
CGACAGCCGTACCGGCCGTCAGGTGCTGGACCTGTTGCGCCGCACCACCACCGAGCTGGGGCAGACGATCGTCATGGTCA
CGCACGATCCGGTCGCCGCCGCCCACGCGGACCGAGTGGTGTTCCTCGCCGACGGTCGGCTCGTCGGACGGATGGACTCC
CCCACCCCCGCCGCGGTCGCCGACCACATGACCCACCTCGGGGAGTGGTGA

Protein sequence : 
MSSFASSPPFVESPPRAAVRLTDVTRTYGSGRTRVTALDDVSLTLAPGSFTAIMGPSGSGKSTFLHCAAGLDQPTRGSVW
LGDTEISALKPKARTVFRRDHMGFVFQAYNLMAALTVEQNVTLPLLLAGRTADRGHLDHVLDAVGLADKRHRRPAEMSGG
QQQRVAIARALITQPHAVFADEPTGALDSRTGRQVLDLLRRTTTELGQTIVMVTHDPVAAAHADRVVFLADGRLVGRMDS
PTPAAVADHMTHLGEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-44 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-44 47
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-44 47
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-41 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
REQ_15940 YP_004006356.1 ABC transporter ATPase CP001581.1.gene598.p Protein 3e-47 47
REQ_15940 YP_004006356.1 ABC transporter ATPase CP001581.1.gene798.p Protein 3e-47 46
REQ_15940 YP_004006356.1 ABC transporter ATPase NC_012469.1.7686878. Protein 6e-42 45
REQ_15940 YP_004006356.1 ABC transporter ATPase NC_008702.1.4606598. Protein 7e-39 42