Gene Information

Name : REQ_15140 (REQ_15140)
Accession : YP_004006277.1
Strain : Rhodococcus equi 103S
Genome accession: NC_014659
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1577153 - 1577920 bp
Length : 768 bp
Strand : +
Note : -

DNA sequence :
ATGGTGGGCATGCCAACCGAAACCGAGATGCCCACCGAAACCACAGTGGCCGCCCGCGCGGTCAACCTGACGAAGGTCTA
CGGGTCGGGGGACACCCAGGTCCACGCGCTCGCGGGCGTGTCCGCGGAGTTCGCGCGGGGGGAGTTCACCGCCATCATGG
GGCCGTCCGGCTCCGGTAAGTCGACGCTCATGCACTGCCTCGCCGGTCTCGACGCCGCGTCGTCGGGTGCGGTGCTGATC
GGTGCCACGGATCTGACCACGCTCTCGGACAAGCAGATGACGCAGCTGCGCCGCGACCGGATCGGGTTCGTGTTCCAGGC
GTTCAACCTGGTGCCGACGCTCACGGCACTGGAGAACATCACGCTGCCGCTGGACATCGCCGGCCGGAAGGCCGACCAGC
AGTGGCTCGACACCGTGGTCGATCGGTTGGGTCTGCGCGACCGCCTCGACCATCGCCCCGGTGAACTGTCGGGCGGTCAG
CAGCAGCGAGTCGCGTGCGCGCGGGCGCTCGCCGGGCAGCCGGAGATCATCTTCGGTGACGAGCCGACCGGCAATCTCGA
TTCGCGTTCGTCCGGGGAGGTGCTCTCGATCCTGCGAGCGGCGGTCGACGAGTTCCACCAGACCGTCGTGATCGTCACGC
ACGATCCGCGGGCCGCGAGCTTCGCCGACCGCGTGGTGTTCCTGGCCGACGGGCAGATCGTCGACGAGTTGCGCGAGCCG
ACCGCGGAGTCGGTGCTCGACCGCATGAAGAACCTCGAGACGGTCTGA

Protein sequence :
MVGMPTETEMPTETTVAARAVNLTKVYGSGDTQVHALAGVSAEFARGEFTAIMGPSGSGKSTLMHCLAGLDAASSGAVLI
GATDLTTLSDKQMTQLRRDRIGFVFQAFNLVPTLTALENITLPLDIAGRKADQQWLDTVVDRLGLRDRLDHRPGELSGGQ
QQRVACARALAGQPEIIFGDEPTGNLDSRSSGEVLSILRAAVDEFHQTVVIVTHDPRAASFADRVVFLADGQIVDELREP
TAESVLDRMKNLETV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-37 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-37 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
REQ_15140 YP_004006277.1 ABC transporter ATPase NC_008702.1.4606598. Protein 3e-34 48
REQ_15140 YP_004006277.1 ABC transporter ATPase CP001581.1.gene598.p Protein 5e-45 46
REQ_15140 YP_004006277.1 ABC transporter ATPase CP001581.1.gene798.p Protein 8e-39 45
REQ_15140 YP_004006277.1 ABC transporter ATPase NC_012469.1.7686878. Protein 3e-37 42