Gene Information

Name : metB (REQ_12840)
Accession : YP_004006062.1
Strain : Rhodococcus equi 103S
Genome accession: NC_014659
Putative virulence/resistance : Resistance
Product : cystathionine beta and gamma-lyase/cystathionine gamma-synthase metb
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 1339354 - 1340508 bp
Length : 1155 bp
Strand : +
Note : -

DNA sequence :
ATGAGTGAGCAGGGAATTTCCAGCGGTTTCTCCACCAGGGCCATTCACGCCGGTTACGAGCCGGATCCGCAGACCGGTGC
GGTCAACGTCCCGATCTACGCCAGTTCCACGTTCGCGCAGGACGGTGTCGGCGGCATGCGCGGCGGGTTCGAGTACGCGC
GCACGGGCAACCCGACGCGTCGTCCGCTCGAAGCCAACCTCGCGGCGCTCGAATCGGGCACGTTCGGCCGGGCGTTCGGC
TCGGGTATGGCAGCGACGGACTGCGTGCTGCGGTCGCTGCTGCGCCCCGGCGACCACCTGGTGATCCCGAACGACGCCTA
CGGCGGCACGTTCCGACTGATCGACAAGGTCTTCACGCAGTGGGGAATCGAGTACACGCCGGCCGCGGTGTCCGACGTCG
ATGCCGTTCGCGCCGCGATCCGGCCGAACACCAAGCTGGTGTGGGTCGAGACGCCGACGAACCCACTGCTCAACGTCGGT
GACATCGCGGCGATCTCCGAGGTGGCGCAGGCCGCCGGCGCGAAGCTGGTGGTGGACAACACGTTCGCTTCGCCGTACCT
GCAGCAGCCGCTGCAGTTGGGTGCCGACATCGCGCTGCACTCGACGACCAAGTACATCGGTGGCCACTCCGACGTCGTCG
GTGGTGCGCTCGTGACGAACGACGAGGAGCTCGACACCAAGTTCGCGTTCCTGCAGAACGGCGCCGGCGCGGTGCCGGGT
CCGTTCGACGCTTTCCTCACGATGCGTGGCATCAAGACGCTCGCGCTGCGTATGGAGCGGCACAGCGACAACGCCGAGAA
GATCGTCGACCTGCTGACCGGGCACTCCGCGATCGCTCAGGTCATCTACCCGGGCCTCGAGTCGCATCCGGGGCATGCCG
TGGCGGCCAAGCAGATGCGCCGGTTCGGCGGCATGATCTCGGTGCGCCTGAAGGGCGGCCGGCAGGCCGCGCTCGACTTC
TGCGCGCGCACACAGATCTTCACGCTCGCCGAGTCGCTCGGCGGTGTCGAGTCGTTGATCGAGCACCCGGGCGCGATGAC
GCATGCGTCCACGGCCGGGTCCGCGCTCGAGGTTCCCGAGGATCTGGTGCGTCTGTCGGTGGGCATCGAGGACGCCGCCG
ACCTGCTCGCCGACGTCGAGCAGGCGCTCGGCTGA

Protein sequence :
MSEQGISSGFSTRAIHAGYEPDPQTGAVNVPIYASSTFAQDGVGGMRGGFEYARTGNPTRRPLEANLAALESGTFGRAFG
SGMAATDCVLRSLLRPGDHLVIPNDAYGGTFRLIDKVFTQWGIEYTPAAVSDVDAVRAAIRPNTKLVWVETPTNPLLNVG
DIAAISEVAQAAGAKLVVDNTFASPYLQQPLQLGADIALHSTTKYIGGHSDVVGGALVTNDEELDTKFAFLQNGAGAVPG
PFDAFLTMRGIKTLALRMERHSDNAEKIVDLLTGHSAIAQVIYPGLESHPGHAVAAKQMRRFGGMISVRLKGGRQAALDF
CARTQIFTLAESLGGVESLIEHPGAMTHASTAGSALEVPEDLVRLSVGIEDAADLLADVEQALG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-78 48
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-77 47
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 2e-59 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metB YP_004006062.1 cystathionine beta and gamma-lyase/cystathionine gamma-synthase metb BAC0207 Protein 3e-68 44