Gene Information

Name : REQ_11820 (REQ_11820)
Accession : YP_004005965.1
Strain : Rhodococcus equi 103S
Genome accession: NC_014659
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1232065 - 1232757 bp
Length : 693 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCATCGACCTGCGTGACATCGTCCTCACCTACCCCGACGGCGACACCCGCCTGCGCGCCCTCGACGACGTGAGTCT
CCACGTGAGCCGCGGGGAACTGGTCGCCGTGACCGGACCGTCCGGATCCGGCAAGTCGAGCGTCCTGGCCGTCGCAGGGT
TGCTGACCACGCCGGATTCCGGCACCGTCACGATCGACGGCACCGATGTCACGGGCCTCGACCGCGGCGCCCGCACCGAC
GTGCGGCGCGAGAAGCTCGGTTTCGTGTTCCAGCAGTCGAACCTGCTGCCGTCCCTCACCGCCACCGAGCAACTCGAGAT
GATCACGCATCTGAACGGCGGCAAGGTGCGCGAGAGCCGGCGCCGCGCCCGAGACCTGCTCAGCAGCCTCGGTCTCGAGG
GCCAGCTCGACCGGCGGCCGAACCAGCTCTCCGGTGGGCAGCGACAGCGGGTCGCGATCGCCCGCTCACTCGTCAACGAC
CCCGCGGTGCTCCTGGTCGACGAGCCCACGTCGGCCCTCGACGAGGAACGCAGCCGGGAGATCGTCGCGCTGCTGGCGGA
CCTGAGCCGCGAACGATCCGTCGCGACGGTCATGGTGACCCACGACCTGAGCCAACTCGATCTCGTCGACGCCGCCTTCG
AGATGCACAGCGGTGCGCTGCGGCCGCGCCCGATCGCTACAGCAGTGAACTGA

Protein sequence : 
MSIDLRDIVLTYPDGDTRLRALDDVSLHVSRGELVAVTGPSGSGKSSVLAVAGLLTTPDSGTVTIDGTDVTGLDRGARTD
VRREKLGFVFQQSNLLPSLTATEQLEMITHLNGGKVRESRRRARDLLSSLGLEGQLDRRPNQLSGGQRQRVAIARSLVND
PAVLLVDEPTSALDEERSREIVALLADLSRERSVATVMVTHDLSQLDLVDAAFEMHSGALRPRPIATAVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-23 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-23 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-23 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-23 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
REQ_11820 YP_004005965.1 ABC transporter ATPase NC_008702.1.4606598. Protein 4e-25 46
REQ_11820 YP_004005965.1 ABC transporter ATPase NC_012469.1.7686878. Protein 1e-28 43