Gene Information

Name : REQ_10610 (REQ_10610)
Accession : YP_004005846.1
Strain : Rhodococcus equi 103S
Genome accession: NC_014659
Putative virulence/resistance : Resistance
Product : sodium/monocarboxylic acids symporter mctc
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 1112064 - 1113707 bp
Length : 1644 bp
Strand : +
Note : -

DNA sequence :
GTGATCACCACACTCGCACAGTCCGCTCCGGCAACGGATGTCGGCAATCCGCTGTTCAACATCGCGATCTTCGTCGCGTT
CGTCGTCGGCACCATGACCCTGGTGATCCGGGCCAGCAAATCGACGAAGAAGGCGTCGGACTTCTACACCGGCGGCGGCC
AGTTCTCCGGCCCGCAGAACGGTTTCGCCATCGCCGGTGACTACCTGTCGGCGGCGTCGTTCCTCGGTATCGCCGGCGCC
ATCGCGGTGTACGGATACGACGGGTTCCTGTACTCGATCGGGTTCCTCGTCGCGTGGCTCGTCGCGCTGCTGTTGGTGGC
CGAACTGCTTCGCAACACAGGACGATTCACGATGGCCGACGTTCTGAGCTTCCGGCTGAAGCAGCGTCCGGTGCGGATGG
CGGCGGCATTGTCGACGCTGGTCGTCTCGCTGTTCTACCTGCTCGCGCAGATGGCCGGTGCGGGCGGCCTGGTCGCGCTG
TTGCTGAACATCAAGGACTTCGCGGGACAGGCGATCGTCGTCGCGGTTGTCGGTGTGCTGATGATCGTCTACGTGCTGAT
CGGCGGCATGAAGGGCACCACGTACGTGCAGATGGTCAAGGCCGTCCTGCTCATCGCGGGCGCCGGCATCATGTTCGTCC
TGGTGCTGTTCGCGGTGAAGGGCAACTTCTCGCAGCTGCTGGCCGACGCGCAGAACATGGTCAACGGCTCCGCCAACGAG
GCCGTCGCCGGGCGCGACGTGCTCGCACCGGGCGCCAAGTACGGGATCAGCGACATGTCGCGGCTGGACTTCGTCTCGCT
CGGCATCGCCCTGGTCCTCGGCACCGCGGGCCTGCCGCACGTGCTGATGCGCTTCTACACGGTGCCCACCGCCAAGGAGG
CCCGCCGCTCGGTGACGTGGGCGATCGGATTGATCGGCGCGTTCTACCTGTTCACGCTCGTCCTCGGTTACGGCGCCGCG
AAGATGGTCGGCCCCGATACGATCCTGGCCGCTCCCGGCAAGGAGAACTCGGCGGCCCCGCTGCTGGCGTTCGAACTGGG
CGGCACGATCTTCCTGGGCATCATCTCGGCGGTCGCGTTCGCGACGATCCTCGCGGTCGTCGCCGGCTTGGCGATCACCG
CGTCGGCGTCGTTCGCCCACGACATCTACGCCAGCGTCATCAAGCGCGGCAAGGCGTCGGAGGAGGAGCAGGTCCGGGTC
TCGCGGATCACCGTGGTCGTCATCGGCATCGTCGCGATCGTCCTCGGCATCCTCGCGATGGGACAGAACATCGCGTTCCT
CGTCGCGCTCGCGTTCGCCGTCGCCGCGTCGGCGAACCTGCCGACGCTGCTGTACTCGCTGTTCTGGAAGAAGTTCAACA
CCACCGGCGCGCTGTTCAGCATCTACGGCGGCCTGATCAGCTGCCTGGTGCTCATCGTCTTCTCGCCGGCCGTCTCCGGC
GCCAAGACGTCGATGTTCCCGAACGTCGACTTCGCCTGGTTCCCGCTGGCCAACCCCGGCATCGTGTCGATCCCGCTGGC
GTTCGCGCTCGGCATCGTCGGTACCTGGGTGGGACGGAACAAGCTCGAAGATCCGTTCAAGCAGGCCGAGATGGAGGTCC
GCTCCCTCACCGGTGTCGGCGTCGAGAAGGCCGTGGCCCACTAG

Protein sequence :
MITTLAQSAPATDVGNPLFNIAIFVAFVVGTMTLVIRASKSTKKASDFYTGGGQFSGPQNGFAIAGDYLSAASFLGIAGA
IAVYGYDGFLYSIGFLVAWLVALLLVAELLRNTGRFTMADVLSFRLKQRPVRMAAALSTLVVSLFYLLAQMAGAGGLVAL
LLNIKDFAGQAIVVAVVGVLMIVYVLIGGMKGTTYVQMVKAVLLIAGAGIMFVLVLFAVKGNFSQLLADAQNMVNGSANE
AVAGRDVLAPGAKYGISDMSRLDFVSLGIALVLGTAGLPHVLMRFYTVPTAKEARRSVTWAIGLIGAFYLFTLVLGYGAA
KMVGPDTILAAPGKENSAAPLLAFELGGTIFLGIISAVAFATILAVVAGLAITASASFAHDIYASVIKRGKASEEEQVRV
SRITVVVIGIVAIVLGILAMGQNIAFLVALAFAVAASANLPTLLYSLFWKKFNTTGALFSIYGGLISCLVLIVFSPAVSG
AKTSMFPNVDFAWFPLANPGIVSIPLAFALGIVGTWVGRNKLEDPFKQAEMEVRSLTGVGVEKAVAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 2e-124 69
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 3e-46 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
REQ_10610 YP_004005846.1 sodium/monocarboxylic acids symporter mctc BAC0564 Protein 2e-56 46
REQ_10610 YP_004005846.1 sodium/monocarboxylic acids symporter mctc BAC0570 Protein 6e-53 45