Gene Information

Name : Mfer_0810 (Mfer_0810)
Accession : YP_004004371.1
Strain : Methanothermus fervidus DSM 2088
Genome accession: NC_014658
Putative virulence/resistance : Virulence
Product : nad-dependent epimerase/dehydratase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 783844 - 784794 bp
Length : 951 bp
Strand : -
Note : COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR016040: IPR001509; KEGG: msi:Msm_0327 UDP-glucose 4-epimerase (NAD dependent); PFAM: NAD-dependent epimerase/dehydratase; SPTR: A5UK04 UDP-glucose 4-epimerase (NAD dependent); PFAM: NAD dep

DNA sequence :
ATGTCTACAATGAAAGATAAAAAAATAGTGATAACGGGGGGTTTAGGGTTCATTGGTTCTCACTTAGCCAATGAATTATC
TAAAAATAATGAAGTTACAGTGATAGACAATGGATCAACAGGTGATTTGAAAAATTTAGAAAACGAGAATATAGAGGTCA
TAATGAAAGACATTAATGAAGTCAATTTAAAAAAAATATTTGAAGATAAAGATTATGTTTTTCATCATGCAGCAATAGCA
AGTGTACCTAGAAGTATTGAAAATCCCATAGAATGTCATAAAGTTAATGTAACTGGATCTTTAAAAGTATTATTAGCAGC
TAGAGACACAGATGTTAAAAAAGTCATAAATGCATCATCTTCTGCAGTATATGGTGACAATCCTAATTTACCACTCTCAG
AAGACGATTCTTTGAATCCTTTGTCACCATATGCAGCGTCTAAAGCTTCATCTGAATTATATTGTAAGGTGTTTAATGAA
GTGTATGGCTTAAAAACAGTTTCTTTGAGATATTTTAATGTTTTTGGGCCAAAACAAAATCCACATTCACAATATGCAGC
AGTTATTCCTAAATTTATTTATAAAATGATTAAAAATGAGCCTCCAAAAATTTATGGAGATGGTACCCAAACAAGAGATT
TTATTTATGTTAAAGACGTTGTGAAAATAAATATAAAGGTTGCAGAGTCAAATTTTACAGGTGTATTGAACGTTGCTAGA
GGAGAATCCATCTCTGTAAATAAATTATTTAGATTAATTAAGGAGATTTTAGATGTAGAGGTTGAACCTATATACACAGA
CCCTAGACCAGGAGATATTAAACATTCATGGGCAGACATTAGCCTATTAAAATCAAAATTGAAATTTAAGCCAGGGAATT
TTAAAGAACAACTAAAAGAAACAATAGAATGGTTTAAACAACAAATTTACATTCAGGGTCAATCTTCTTAG

Protein sequence :
MSTMKDKKIVITGGLGFIGSHLANELSKNNEVTVIDNGSTGDLKNLENENIEVIMKDINEVNLKKIFEDKDYVFHHAAIA
SVPRSIENPIECHKVNVTGSLKVLLAARDTDVKKVINASSSAVYGDNPNLPLSEDDSLNPLSPYAASKASSELYCKVFNE
VYGLKTVSLRYFNVFGPKQNPHSQYAAVIPKFIYKMIKNEPPKIYGDGTQTRDFIYVKDVVKINIKVAESNFTGVLNVAR
GESISVNKLFRLIKEILDVEVEPIYTDPRPGDIKHSWADISLLKSKLKFKPGNFKEQLKETIEWFKQQIYIQGQSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 5e-47 41
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 5e-47 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mfer_0810 YP_004004371.1 nad-dependent epimerase/dehydratase VFG0430 Protein 2e-47 41