Gene Information

Name : Calow_0756 (Calow_0756)
Accession : YP_004002126.1
Strain : Caldicellulosiruptor owensensis OL
Genome accession: NC_014657
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 862894 - 863283 bp
Length : 390 bp
Strand : +
Note : KEGG: ate:Athe_0972 ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19

DNA sequence :
ATGGATATAATCAGAGAGATTGAAAGCGAAATGCTAAAAAAAGATATTCCTGATTTCAAACCTGGTGACACAGTAAGAGT
TTACTTTAAGGTCATTGAAGGTGGAAGAGAAAGAGTGCAAGCTTTCGAAGGGCTTGTCATAAAAAGAAGAGGAAAAGGAC
TTTCGGAAACTTTTACTGTTAGAAGAATTTCATATGGTATTGGTGTTGAAAGAGTGTTCCCTCTTCATTCACCCAGGCTT
GAGAAGATTGAAGTTATAAGAAGAGGTAAAGTGAGAAGAGCAAAACTCTACTACATCAGAGAAAAGATAGGTAAGGCTGC
AAAGATTAAAGAGCTTGTTCAACAGCCAAACAATAAAGAGAATAACAATACCGAAGAGACTAACGCTTAA

Protein sequence :
MDIIREIESEMLKKDIPDFKPGDTVRVYFKVIEGGRERVQAFEGLVIKRRGKGLSETFTVRRISYGIGVERVFPLHSPRL
EKIEVIRRGKVRRAKLYYIREKIGKAAKIKELVQQPNNKENNNTEETNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 7e-33 68
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 6e-28 59