Gene Information

Name : Calow_0312 (Calow_0312)
Accession : YP_004001710.1
Strain : Caldicellulosiruptor owensensis OL
Genome accession: NC_014657
Putative virulence/resistance : Unknown
Product : ssra-binding protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0691
EC number : -
Position : 369723 - 370199 bp
Length : 477 bp
Strand : -
Note : KEGG: ate:Athe_0463 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein

DNA sequence :
ATGCCGGAGGCAAAAAAACAAGATGATATAAAGGTCATAGCAACAAACCGCAAAGCTTATCACGACTATTTTATTGAAGA
GACAATCGAAGCAGGAATTGAGCTAAAAGGCACAGAAGTAAAGTCGGTGCGGCTTGGTCATGTTAACCTCAAAGACAGTT
TTGCAAGAGTAGAAGACGGCGAAGTTTTTCTTTACAACATGCATATAAGCCCATATGAAAAAGGCAACATCTTTAACGTT
GACCCAATGAGAGATAGAAAACTACTTTTGCACAAACATGAAATCAACAGGCTTGCAGGTTATGTACAGCAAAAAGGTTA
CACTTTAATCCCATTGAAGATTTACCTCAAAAGAGGTAAAATAAAAGTAGAGCTTGCAGTTGCAAAAGGTAAAAAACTGT
ATGATAAGCGTGAAGCAATAGCAAAAAGAGATGCTGAGCTTGAGATTAAAAAGAAAATGAAAGAGTATTTAAGATGA

Protein sequence :
MPEAKKQDDIKVIATNRKAYHDYFIEETIEAGIELKGTEVKSVRLGHVNLKDSFARVEDGEVFLYNMHISPYEKGNIFNV
DPMRDRKLLLHKHEINRLAGYVQQKGYTLIPLKIYLKRGKIKVELAVAKGKKLYDKREAIAKRDAELEIKKKMKEYLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 1e-35 58
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 3e-29 47
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 8e-25 42