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Name : Calow_2045 (Calow_2045) Accession : YP_004003356.1 Strain : Caldicellulosiruptor owensensis OL Genome accession: NC_014657 Putative virulence/resistance : Unknown Product : type i site-specific deoxyribonuclease, hsdr family Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 2153365 - 2156466 bp Length : 3102 bp Strand : - Note : TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: protein of unknown function DUF450; type III restriction protein res subunit; KEGG: type I site-specific deoxyribonuclease, HsdR family; SMART: DEAD-like helicase DNA sequence : ATGAATCTCAATCAAAATTTTGAGAGTGTGGTAGAGCAGGCGGCCATCAAATGGTTTAAGGACATAGGCTACGAATATTT ACACGGCAGTAAGATACCAATTGAAGATAGGGAAGACTACAGAGAAGTTATTTTAAAAAATAGGCTTTATAAGGCCTTAA TAAGATTGAATCCCGAACTTCCGCTGGAGTGCATTGAGGAAGCGGTACGCCAGCTGAAGAACCTCCAGTATCCAAGAATA GAGTTGAACAACAGAGAGATACATAAAATATACCGCAATGGTGCGAAAGTTACAAGACGCAACAGTGAGGGTGAAGAGGT AGGAGAAATAGTAAAGATATTTGACTATGAAAACCCAAAAAACAATGATTTTCTTGTCTGCAATCAAGTGAAAATTAAGG GCGCAGGTGTAAGAATCCCTGATATTGTTGTTTATATTAACGGCCTGCCAGTAGGGTTATTCGAACTGAAAAATCCATTA GATGAGGCGGCCACAATAGAAGGGGCATATAGACAGCTTGAGCTGTACAAAAGGGATATTCCCGACATTTTTGCTTACAA TGAGATCTGCGTTGTATCTGATGGGAATAAAGCAAAAGCAGGAACGCTTACTGCACCCTGGGAGAGGTTTTCTGCATGGA AATCCATTGACGGTGTCAGTAGCGTAGAGGGGATGCCAGAACTTGAAGTTTTGATAAAAGGCATGTTTGATAAAAGAAGA GTTCTCGACATAATAAGGAATTTTATTACCTTTTCTACTGTTAAGGATGAAGTAATTAAAATTATGGCTATGTATCACCA GTATTACGGTGTAAATAAAGCAGTAGAAGAAACAATCAGGGCCACATCTCCTGGCGGTGACAGAAGAATAGGCACATTCT GGCATACTCAAGGCAGCGGCAAAAGCCTTTCTATGGTGTTTTATACGGGAAAGATAATAGAGCTTAAAGAACTTCAGAAT CCTACAATTGTAGTCATTACCGACCGCAACGACCTTGACGACCAGCTGTATGAAACTTTTTGCAATGCAAGCGACCTAAT TCCATATCCAAAGCAGGCAGAAAGCGTAGAAGACTTAAAAGAAAAACTTTCGCAGGTTGCGGCTGGGGGCATCTTTTTTA CCACAATACAGAAATTTCAGGCGGAAGCAGAAGAGGTTTCAGAGGTTGTTGATCCAAAACTTAAAAAAGCTTTAAAGAAG GGCAAAACCTATCCCCTTCTTTCTGACCGTAGCAATATCATTGTTATTGTCGATGAAGCTCACAGGTCGCACTATGAATT TATTGACGGCTTTGCGAAGTATATAAGGCAGGCGCTTCCTAACGCCAGCTTCATTGGCTTTACGGGGACACCTATTGATC TTGAAGACAGGTCTACACTTCAGGTGTTTGGAGACTATATCAGCATCTACGATATGAAGCAGGCGGTAGAAGACAAAGCC ATTGTGCCCATTTATTATGAGGGAAGGTTGGTAAAGCTTCATTTGATAAACGAAGATATTGACAGAGACTTTGAAGAAGT GACAGAAGGTGAGGAAGAAGAGGTAAAGAACAAACTCAAGACAAAATGGGCAGCTTTGGAGGCATTAGTGGGGACCAAAG AAAGGATTGAAACCATAGCAAGGGATATTGTAGAGCACTTCGAAGAAAGGTGCAAGGTTCTTGAGGGCAAAGGCATGATA GTATGTATGAGCCGAAGGATTTGCGTTGACCTTTACAACGAAATAATTAAGTTAAGACCGCACTGGCACAGTGATGATTT AGACAAAGGCGTAATTAAAATTGTAATGTCAGGAAATCCTTCGAAAGATCCTAAAGATTTTTTGCCCCACCTATATACGA AGTTACAAATAAAAGAGATTGAAAAAAGAATGAAAGACCCTAACGATCCTCTTAAACTTGTGATTGTTAGGGATATGTGG CTTACTGGCTTTGATGTGCCGTGCCTGCATACAATGTATATTGACAAGCCAATGCGAGGGCACAACTTAATGCAGGCTAT AGCCAGAGTAAACAGGGTCTTTAAGGACAAACCTGCAGGATTGGTTGTAGATTACATCGGTATTGCTGATGACTTAAAAC TGGCACTGGCAAACTACACAAGAAGCACGGGCAAGGAGGCTGCTACCTTACCCATAGACGAAGCAATAAGGATTATGCAG GAGAAGTATGATATTGTTTGCTCGTATTTCCACGGCATTGATTTTTCGGGTTGGGAAGAAAAAAGTGCAGAGGACAAATT AAGTCTTTTAAAGCAGGCTATGGACTTAATAAATAAGGATGAGACCACAAAGAAAAATTTTTTGGATCAGTGCATGGCAT TGTGCAAGGCTTTTGCCCTTGTAATACCGCGAGAAGAAGCGATGCGTATTCGTTCAGATGTTGCCTTTTTCCAAGCAGTA AGAAGCAATATTGTCAAATACACGCCGCCTAAAGGGTTATCAATCGAAGAGCTGGACAGTGCCATAAAGCAGATTATTTC CGAGGGTGTTGCTGCAAGCGACAAACCAATTGACATATTCGATGCGGCGGGGCTTAAAAAACCAGACTTGTCTATTCTGA GTGAAGAATTTTTAAATAAACTTATTGGGCATGAGAATAAAAACTTGCAGATTGAGGTTTTGCGTAAACTGCTCAATGAT GAGATTAAGGCTAAGATCAGGAAGAATCATGTAAAGTATGCTTCTTTTAAAGAAATGATAGAAAAAGTTTTGAATAAGTA TCATAATCGTGCTATTACATCTGCTGAGGTTATAAAACACCTTATTGATTTGGCAAAAGAAATGCAGAATATGGACAAAC GGGCAAAAGAAATGAACTTAACGGAAGAAGAAATGGCTTTTTACGACATTGTATGTCAGGGTGAAGAGGCTATTTTAAAT GACGAAGAGGCAAAGGAAATTGCAAGAGAGCTTGTGCGAATTATAAAAAGTAAAACCGAGGGACAGGTAGATTGGACTAT AAAAGAAAACATTAAGGCATCCATTAGGGCAACGGTAAAAAGATTACTAAGAAGAAAGGGCTTCAAAGATCCACAAAAGC TTGATAATGTAGTTAAATTGGTCATTGAACAGGCTGTATCTCTCTTTGAAGATGCTGCTTAA Protein sequence : MNLNQNFESVVEQAAIKWFKDIGYEYLHGSKIPIEDREDYREVILKNRLYKALIRLNPELPLECIEEAVRQLKNLQYPRI ELNNREIHKIYRNGAKVTRRNSEGEEVGEIVKIFDYENPKNNDFLVCNQVKIKGAGVRIPDIVVYINGLPVGLFELKNPL DEAATIEGAYRQLELYKRDIPDIFAYNEICVVSDGNKAKAGTLTAPWERFSAWKSIDGVSSVEGMPELEVLIKGMFDKRR VLDIIRNFITFSTVKDEVIKIMAMYHQYYGVNKAVEETIRATSPGGDRRIGTFWHTQGSGKSLSMVFYTGKIIELKELQN PTIVVITDRNDLDDQLYETFCNASDLIPYPKQAESVEDLKEKLSQVAAGGIFFTTIQKFQAEAEEVSEVVDPKLKKALKK GKTYPLLSDRSNIIVIVDEAHRSHYEFIDGFAKYIRQALPNASFIGFTGTPIDLEDRSTLQVFGDYISIYDMKQAVEDKA IVPIYYEGRLVKLHLINEDIDRDFEEVTEGEEEEVKNKLKTKWAALEALVGTKERIETIARDIVEHFEERCKVLEGKGMI VCMSRRICVDLYNEIIKLRPHWHSDDLDKGVIKIVMSGNPSKDPKDFLPHLYTKLQIKEIEKRMKDPNDPLKLVIVRDMW LTGFDVPCLHTMYIDKPMRGHNLMQAIARVNRVFKDKPAGLVVDYIGIADDLKLALANYTRSTGKEAATLPIDEAIRIMQ EKYDIVCSYFHGIDFSGWEEKSAEDKLSLLKQAMDLINKDETTKKNFLDQCMALCKAFALVIPREEAMRIRSDVAFFQAV RSNIVKYTPPKGLSIEELDSAIKQIISEGVAASDKPIDIFDAAGLKKPDLSILSEEFLNKLIGHENKNLQIEVLRKLLND EIKAKIRKNHVKYASFKEMIEKVLNKYHNRAITSAEVIKHLIDLAKEMQNMDKRAKEMNLTEEEMAFYDIVCQGEEAILN DEEAKEIARELVRIIKSKTEGQVDWTIKENIKASIRATVKRLLRRKGFKDPQKLDNVVKLVIEQAVSLFEDAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 45 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 45 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 45 |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 43 |
