Gene Information

Name : Calow_1660 (Calow_1660)
Accession : YP_004003005.1
Strain : Caldicellulosiruptor owensensis OL
Genome accession: NC_014657
Putative virulence/resistance : Resistance
Product : arsenical-resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0798
EC number : -
Position : 1730485 - 1731531 bp
Length : 1047 bp
Strand : +
Note : KEGG: ate:Athe_1933 arsenical-resistance protein; TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter

DNA sequence :
ATGGAACAGAAAAAAGGCTTGTCGTTTTTAGATAGATTTTTGACAGTCTGGATTTTGCTTGCTATGATTGTAGGTGTTAT
GATAGGATATTTTTCCCCAAACTTTGCAAATGTGCTAAATAAGCTTAGTATTGGAACAACGTCAATTCCAATTGCTATTG
GGCTGATTTTGATGATGTATCCTCCCCTTGCAAAAGTTAGGTATGAAGAAATAGGAAAGACAAAAGCAGGTAAAAAACCT
TTTGGAATTGCAATTTTATATAACTGGTTTATAGGACCTGTTGTCATGTTTTTGCTTGCTATATTGCTTTTGAGAGATTA
TCCGCATTACATGATAGGAGTGATACTTGTAGGCCTGGCTCGATGCATTGCGATGGTTCTTGTGTGGAATGACCTTGCAG
ATGGTGACAGGGATTTTGTTGCGGGACTTGTTGCTCTCAATGCAATCTGGCAAGTTCTTACCTATTCAGTACTTGCATAT
GTATTTATAAAGATACTTCCTCCACTTTTTGGAATAAGTACATCTGCAATTGCTTTGCATATTTCAATGAAAGAAATAGC
AATTTCAGTATTTATTTATCTTGGCATTCCTTTTATAGCAGGAGTATTAACAAGGATTTTACTTGTCAGGGAAAAAGGCA
GAGAATGGTATGAGAAAAATTTTGTGCCCAAGATAAGCCCAATAACTTTAATAGCATTACTCTTTACAGTCATTGTGATG
TTTTCTCTAAAAGGAAAATACATTGTTACATTACCGTTTCATGTATTGAGGATTGCAATACCACTTTCGTTGTATTTTGT
TATAATGTTTTTGATAACATTTTTTACATCATACAAAAGAAAATATCCTTATCCTGAAAGTGCAACTGTTGGTCTGACAG
CTGCAAGTAACGATTTTGAATTAGCAATTGCAGTTGCTGTTGCAACTTTTGGTTTGGGGTCAGGTGAGGCGTTTGCAACA
GTTATTGGACCCCTGATTGAGGTTCCTGTTATGCTTCTTTTAGTAAATGTTGCTCTGTATTTAAAGAAGAAACTTTATAG
CTCTTAA

Protein sequence :
MEQKKGLSFLDRFLTVWILLAMIVGVMIGYFSPNFANVLNKLSIGTTSIPIAIGLILMMYPPLAKVRYEEIGKTKAGKKP
FGIAILYNWFIGPVVMFLLAILLLRDYPHYMIGVILVGLARCIAMVLVWNDLADGDRDFVAGLVALNAIWQVLTYSVLAY
VFIKILPPLFGISTSAIALHISMKEIAISVFIYLGIPFIAGVLTRILLVREKGREWYEKNFVPKISPITLIALLFTVIVM
FSLKGKYIVTLPFHVLRIAIPLSLYFVIMFLITFFTSYKRKYPYPESATVGLTAASNDFELAIAVAVATFGLGSGEAFAT
VIGPLIEVPVMLLLVNVALYLKKKLYSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 1e-88 55
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 1e-88 55
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 9e-69 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Calow_1660 YP_004003005.1 arsenical-resistance protein BAC0573 Protein 3e-96 60
Calow_1660 YP_004003005.1 arsenical-resistance protein BAC0004 Protein 2e-78 51