Gene Information

Name : Calow_1659 (Calow_1659)
Accession : YP_004003004.1
Strain : Caldicellulosiruptor owensensis OL
Genome accession: NC_014657
Putative virulence/resistance : Resistance
Product : protein-tyrosine phosphatase, low molecular weight
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : -
Position : 1730070 - 1730483 bp
Length : 414 bp
Strand : +
Note : KEGG: ate:Athe_1932 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight

DNA sequence :
ATGAAACCTAAAGTTGCTTTTGTTTGTGTTGGTAATTCGTGTCGAAGCCAGATGGCAGAAGGTTTTGCAAAACACTACGG
TAAAGATTTGATTGAAGTGTACAGTGCAGGAACAGATATTGCAAAAGAGATAAATCCGCTTGCCATTGAAGTGATGAAAG
AGGTTGGAATTGATATGTCTTCCCATTTTCCAAAGACAATATTTGACATCCCCAAAGAAGTTGATTTTTTAATCACCATG
GGTTGCGGTGTTGAGTGCCCATTTATCCCATGCAAGGTAAAAGAGGACTGGGGATTACCTGACCCAGCAGGAAAACCTAT
TGAAGAATTTAGAAAAGTAAGAGATGAAATAGAAAAAAAGGTTTTGGTTCTTATTGAAAGAATTAAAAAAGAATACTATA
GGGAGGGAAAATAA

Protein sequence :
MKPKVAFVCVGNSCRSQMAEGFAKHYGKDLIEVYSAGTDIAKEINPLAIEVMKEVGIDMSSHFPKTIFDIPKEVDFLITM
GCGVECPFIPCKVKEDWGLPDPAGKPIEEFRKVRDEIEKKVLVLIERIKKEYYREGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC YP_005754064.1 arsenate reductase Not tested Type-XI SCCmec Protein 4e-20 52
arsC YP_252023.1 arsenate reductase Not tested SCCmec Protein 9e-19 49
arsC YP_252016.1 arsenate reductase Not tested SCCmec Protein 3e-18 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Calow_1659 YP_004003004.1 protein-tyrosine phosphatase, low molecular weight BAC0032 Protein 2e-18 50
Calow_1659 YP_004003004.1 protein-tyrosine phosphatase, low molecular weight BAC0580 Protein 7e-19 49
Calow_1659 YP_004003004.1 protein-tyrosine phosphatase, low molecular weight BAC0581 Protein 3e-16 48
Calow_1659 YP_004003004.1 protein-tyrosine phosphatase, low molecular weight BAC0586 Protein 7e-17 45