Gene Information

Name : Calow_1569 (Calow_1569)
Accession : YP_004002915.1
Strain : Caldicellulosiruptor owensensis OL
Genome accession: NC_014657
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1635724 - 1638213 bp
Length : 2490 bp
Strand : -
Note : KEGG: ate:Athe_1825 ATPase AAA-2 domain protein; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; Clp ATPase-like; SMART: AAA ATPase

DNA sequence :
ATGTTTCAAGGAAGGTTTACAGAAAGAGCTGAGAAAGCAATAATGCTTGCGCAGCAAGCTGCTGCCGAGCTTGGCCATAA
CTATGTTGGAACAGAGCACTTGCTTTTAGGACTTATAAGAGAAGGTGGCGGCATTGCAGCAAGGGTTTTACAAAGTCAAG
GTGTTACTGAAGAAAAAATAATTGATGAAATTGAAGAGCTGATTGGACGTGGTGACTATCAGCTTCCCCAGCCACCAACA
GGTTTCACTCCAAGGACAAAAAGGGTGTTTGAGATTGCCTTTATGGAAGCAAGACGGCTTGGTAGTAGCTATATCAGCAC
TGAACATATCCTGCTTGCTATAATGAGAGAAGGTGAAAGTGTTGCTGTCAGGATTTTAATGGATCTTGGTGTTGATCCTC
AGAGGCTTTTTGAAGAGATTATGAAGCTTTTGAACGAGGATGCAAAAAATGTTGGTGGGGTGTCCCCGCAGCAGCAGATA
AATTTCCAAACACAGAACACTCCAACATTGAATCAGTTTAGCAGAGACTTAACCCAGCTTGCTCTTGAAGGGAAAATTGA
TCCTGTAATTGGTCGTGAAAAAGAAATAGAAAGAGTAATCCAGATTTTGTCGAGAAGAACCAAAAATAATCCGTGTTTGA
TTGGTGAGCCGGGTGTGGGTAAAACTGCTATTGTTGAAGGACTTGCTCAGAAGATTGTTGAAGGAAATGTTCCTGAACTG
TTGAGAAACAAAAGGGTTGTGGCTTTAGATCTTTCAGCTATGGTTGCAGGATCGAAGTTCAGAGGAGAGTTTGAAGAAAG
GCTCAAAAAAGCTATGGAAGAGGTGCGAAAAGCAGGAAATGTTATTTTGTTTATCGATGAGATGCATACCATAATTGGTG
CTGGGGCTGCAGAAGGAGCAATTGATGCATCAAATATCTTAAAACCAGCTCTTGCACGCGGTGAGATACAGGTCATTGGA
GCAACAACACTTGATGAGTATAGAAAACATATAGAAAAGGACGCTGCACTTGAGCGAAGGTTCCAGCCAATTTTAGTAGG
TGAGCCAACACCTGAAGAGGCTATACAGATTTTAAAAGGGCTTAGAGACAAATACGAGGCTCATCATGGTGTGAAGATAA
CTGATGAAGCTATAAAAGCTGCTGTTGAGCTGTCTACCAAATATATCACAGATAGATATTTGCCGGACAAAGCAATTGAC
CTTATTGACGAGGCAGCATCAAGAGTTAGACTCAGAATGTATACTTTACCACCGCATGTGAAGGAGTTTGAAGAGAAGAT
TGAAAAACTTGAGAAGGAAAAGGAAGAGGCTATAAGGCTTCAGGAGTATGAAAAAGCTGCAAAGATAAGAGATGAAATAA
TGAAGCTTCGTCAGGAACTTGAAAAGATCAAAAATTCATGGACAAATGACCAGCAAAAGACACAGCCAATTGTTACAGAA
GATGACATTGCATATATCGTGTCAAGCTGGACAGGAATTCCGGTAAATAAACTTACCGAAGATGAATCAGAAAGGCTATT
AAAGCTTGAAGAGGTTTTGCACAGACGAGTAGTTGGACAAGATGAGGCTGTCAAAGCTGTTGCAAGAGCTATAAGACGAG
GAAGGGTTGGGCTCAAAGATCCGAAAAGACCAATTGGTTCGTTTATCTTCCTTGGACCTACCGGTGTTGGGAAAACAGAG
CTTGCACGAGCTTTGGCTGAAGCGCTGTTTGGTACAGAAGATGCTCTGATAAGAATAGATATGTCGGAGTATATGGAGAA
GTTCAATGTATCAAAGCTCATTGGTTCACCTCCAGGCTATGTTGGGTATGAAGAAGGTGGTCAGCTTACCGAGAAAGTAA
GAAGAAGACCATATTCTGTGGTGCTCTTCGACGAGATAGAAAAGGCACACCCTGATGTTTTTAATTTGCTTTTGCAGATA
CTTGACGATGGAAGACTTACAGACTCTCAGGGTAGGACAGTAAGTTTTAGAAACACTGTTATTATCATGACATCTAACAT
TGGTGCAAACCTTATTACAAATCCTAAAAAATTGGGATTTTCTACTTCAGAGGACGAAAAACAAAAGACATATGAGAGAA
TAAAAGAAAATGTCATGAATGAGCTGAAAAAAACTTTTAGACCAGAGTTTTTGAACAGAATTGATGAAATTATAGTTTTC
CATCCGCTTGACGAAGAAGATGTTAAAAAGATTGTAGAGATAATGCTCAAAAACTTACAGGAGAGAATAAAAGCAAGTGA
GTATTATGCAGAGTTTACCCCAGCTTTGGTGGAGGCAATTGCTAAAAAAGGATTTGATCCTGTGTTTGGTGCAAGACCGC
TAAAACGTGCAATTCAGAGCATGGTAGAAGATAAGATTTCAGAGGCTATCCTGGAAGGAAAAATAAAGCAAGGTGATGAG
TTTATAGTGGACTTTGTTGAAGGAAATACAGTAATAATCAAAAAAGAAAAGGCATCTACATCTTCATCTGAAATGGCTCA
ATCACAGTAA

Protein sequence :
MFQGRFTERAEKAIMLAQQAAAELGHNYVGTEHLLLGLIREGGGIAARVLQSQGVTEEKIIDEIEELIGRGDYQLPQPPT
GFTPRTKRVFEIAFMEARRLGSSYISTEHILLAIMREGESVAVRILMDLGVDPQRLFEEIMKLLNEDAKNVGGVSPQQQI
NFQTQNTPTLNQFSRDLTQLALEGKIDPVIGREKEIERVIQILSRRTKNNPCLIGEPGVGKTAIVEGLAQKIVEGNVPEL
LRNKRVVALDLSAMVAGSKFRGEFEERLKKAMEEVRKAGNVILFIDEMHTIIGAGAAEGAIDASNILKPALARGEIQVIG
ATTLDEYRKHIEKDAALERRFQPILVGEPTPEEAIQILKGLRDKYEAHHGVKITDEAIKAAVELSTKYITDRYLPDKAID
LIDEAASRVRLRMYTLPPHVKEFEEKIEKLEKEKEEAIRLQEYEKAAKIRDEIMKLRQELEKIKNSWTNDQQKTQPIVTE
DDIAYIVSSWTGIPVNKLTEDESERLLKLEEVLHRRVVGQDEAVKAVARAIRRGRVGLKDPKRPIGSFIFLGPTGVGKTE
LARALAEALFGTEDALIRIDMSEYMEKFNVSKLIGSPPGYVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNLLLQI
LDDGRLTDSQGRTVSFRNTVIIMTSNIGANLITNPKKLGFSTSEDEKQKTYERIKENVMNELKKTFRPEFLNRIDEIIVF
HPLDEEDVKKIVEIMLKNLQERIKASEYYAEFTPALVEAIAKKGFDPVFGARPLKRAIQSMVEDKISEAILEGKIKQGDE
FIVDFVEGNTVIIKKEKASTSSSEMAQSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 55
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-94 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Calow_1569 YP_004002915.1 ATPase AAA-2 domain-containing protein VFG0079 Protein 0.0 61
Calow_1569 YP_004002915.1 ATPase AAA-2 domain-containing protein VFG0080 Protein 2e-151 51