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Name : Calow_1220 (Calow_1220) Accession : YP_004002578.1 Strain : Caldicellulosiruptor owensensis OL Genome accession: NC_014657 Putative virulence/resistance : Unknown Product : DNA polymerase i Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : - Position : 1304234 - 1306786 bp Length : 2553 bp Strand : - Note : TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; KEGG: ate:Athe_1441 DNA polymerase I; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class DNA sequence : ATGAAATTAGTTATATTTGATGGTAACAGTATTTTATATAGAGCTTTTTTTGCTCTTCCTGAACTGACAACTTCAAGTAA TATTCCGACAAATGCTATTTATGGGTTTATAAATGTAATATTAAAATATTTAGAACAAGAGAGCCCCGATTATGTTGCAG TTGCATTTGATAAGAAAGGAAGACAGGCACGAAAAAGCGAGTATGAAGAATACAAAGCTAACAGAAAACCTATGCCAGAT AATCTTCAAGTACAAATTCCTTATGTTAGGGAGATTCTTTATGCTCTTAATATTCCAATTATTGAGTTTGAAGGTTATGA AGCAGATGATGTAATTGGGTCGCTTGTAAACATGTTCAAAAATATTGATTTAGATATTGTTATTATAACTGGTGATAAGG ATACTCTTCAGTTGTTAGATAAAAACGTAGTTGTGAAGATTGTTTCAACAAAATTTGATAAAACAACAGAAGATTTATAT ACTGCAGAGAATGTAAAAGAGAAATATGGAGTTTGGGCAAATCAGGTACCGGATTATAAAGCGCTTGTTGGAGATCAATC AGATAACATTCCAGGGGTAAAAGGAATTGGGGCAAAGAGTGCTCAAAAACTTTTGAAGGAATACTCATCTTTGGAAGAAA TATACCAAAATTTAGATAAAATTAAAGGTTCTATCCGCGAAAAATTAGAAACAGGCAAAGACATGGCATTTTTATCCAAG CGCTTGGCAACAATTGTATGTGATTTACCACTAAATGTTAAACTTGAAGACTTAAGAACAAAAGAGTGGAACAAGGAAAA ACTATATGAGATTTTAGTCCAATTAGAGTTCAAGAGTATAATAAAACGGTTGGGGCTGTCAGAAGAGGTTCAATTTGAGT TTGTTCAACAGCTAACTAATATTCACGATGTAGAGCAAAAAAAGCTTGAGAGCATATCACAGATAAGATCAAAAGATATC TCATTAATGTTTGTGCCAGAAGAAAAATGTTTTTATTTATACGACAAAGAAAGTAATACTGTGTTTGTAACAAGAGAAAG ACATTTAATAGAGGAGATTTTAAAAAGTGAATCTGTAAAAATTGTATATGATTTAAAAAATATGTTTCATGAACTCTACT TAGAAAACACAGATAATATTAGAAATTGTGAGGATGTAATGATTGCTTCCTATGTTCTTGACAGCACAAGAAGTTCATAT GAATTGGAAACGTTGTTTATGTCCTACTTAAACACCGACTTGGAAGCTGTGAAAAAGGATAAAAAAGTGACATCGGTAAT CCTTTTGGAACGATTATGGGACGAGCTTTCAAGCTTAATCGATTTAAATTCGTGCCAGTTTGTGTATACAAATATAGAAC GTCCTCTTATTCCAATTCTATACGAGATGGAAAAAGCAGGATTTAAGGTAGACAGAGATGCCCTGCTTCAGTATACTAAG GAGATTGAAAGCAAAATATTAAATCTTGAGAAGCAGATATATCAAATTGCAGGTGAGTGGTTTAATATAAATTCACCCAA ACAACTTTCTTACATTTTGTTTGAGAAACTAAAACTTCCTGTAATAAAAAAGACAAAAACAGGATATTCCACTGATGCTG AGGTTTTAGAAGAGCTTTTTGACAAACATGAGATAGTTCCTCTTATTTTGGATTACAGGATGTATACCAAGATACTAACA ACCTATTGTCAAGGATTACTCCAGGCAATAAATCCTTCTTCAGGCAGAGTCCATACAACATTTATCCAAACAGGAACAGC AACAGGAAGACTTGCAAGTAGTGATCCTAATTTACAAAATATACCTGTAAAATACGATGAAGGAAGATTAATAAGAAAAG TTTTTATACCTGAAGAAGGGCATGTACTGATTGATGCAGATTATTCCCAAATTGAACTTAGAATACTTGCCCATATTTCT GAAGATGAGAGACTTATAAATGCCTTTAAAAATAACGTTGACATCCATTCGCAGACAGCAGCTGAGATTTTTGGTGTAGA TATAGACGATGTTACCCCAGAGATGAGAAGTCAAGCTAAAGCAGTAAATTTTGGTATCGTTTATGGAATTTCTGATTATG GACTTGCAAGGGATATTAAGATTTCCAGGAAAGAGGCTGCAGAGTTTATAAATAGGTATTTTGAACGTTATCCTAAAGTT AAGGAGTATTTGGACAATATTGTTAAATTTGCTCGTGAAAATGGATATGTTTTGACTTTATTTAATAGAAAAAGATATAT AAAGGACATAAACTCTACAAACAGAAATACAAGAAGTTATGCAGAAAGGATTGCGATGAACTCGCCGATTCAGGGCAGCG CTGCTGATATTATGAAATTGGCAATGATTAAAGTGTATCAAAAGCTTAAGGAAAATAATCTTAAAGCCAAAATAATATTA CAGGTGCATGATGAGCTTTTAATAGAAGCTCCATACGAAGAAAAGGATATAGTAAAAAGAATAGTAAAAACCGAAATGGA AAATGCAGTAGCTTTAAAAGTGCCTCTGGTGGTTGAGGTGAAAGAAGGACTGAACTGGTATGAGACAAAATAA Protein sequence : MKLVIFDGNSILYRAFFALPELTTSSNIPTNAIYGFINVILKYLEQESPDYVAVAFDKKGRQARKSEYEEYKANRKPMPD NLQVQIPYVREILYALNIPIIEFEGYEADDVIGSLVNMFKNIDLDIVIITGDKDTLQLLDKNVVVKIVSTKFDKTTEDLY TAENVKEKYGVWANQVPDYKALVGDQSDNIPGVKGIGAKSAQKLLKEYSSLEEIYQNLDKIKGSIREKLETGKDMAFLSK RLATIVCDLPLNVKLEDLRTKEWNKEKLYEILVQLEFKSIIKRLGLSEEVQFEFVQQLTNIHDVEQKKLESISQIRSKDI SLMFVPEEKCFYLYDKESNTVFVTRERHLIEEILKSESVKIVYDLKNMFHELYLENTDNIRNCEDVMIASYVLDSTRSSY ELETLFMSYLNTDLEAVKKDKKVTSVILLERLWDELSSLIDLNSCQFVYTNIERPLIPILYEMEKAGFKVDRDALLQYTK EIESKILNLEKQIYQIAGEWFNINSPKQLSYILFEKLKLPVIKKTKTGYSTDAEVLEELFDKHEIVPLILDYRMYTKILT TYCQGLLQAINPSSGRVHTTFIQTGTATGRLASSDPNLQNIPVKYDEGRLIRKVFIPEEGHVLIDADYSQIELRILAHIS EDERLINAFKNNVDIHSQTAAEIFGVDIDDVTPEMRSQAKAVNFGIVYGISDYGLARDIKISRKEAAEFINRYFERYPKV KEYLDNIVKFARENGYVLTLFNRKRYIKDINSTNRNTRSYAERIAMNSPIQGSAADIMKLAMIKVYQKLKENNLKAKIIL QVHDELLIEAPYEEKDIVKRIVKTEMENAVALKVPLVVEVKEGLNWYETK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 2e-139 | 42 |
