Gene Information

Name : Calow_1057 (Calow_1057)
Accession : YP_004002420.1
Strain : Caldicellulosiruptor owensensis OL
Genome accession: NC_014657
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 1143575 - 1145326 bp
Length : 1752 bp
Strand : +
Note : KEGG: ate:Athe_1266 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; PEP-utilising protein mobile region

DNA sequence :
TTGAGAAAAACAAAAATAATTTGTACATTGGGTCCAGCGAGCGACTCAGAGGAGATAATAAGAAAACTTGTTGAAAATGG
AATGGACGTTGTGAGATTAAATTTTTCTCATGGTACTCATGAAGAACATAAGAAAAAGATTGACATGGTAAAAAAAATAA
GAGAAGAACTTGACAAGCCTATTCCCATTTTGCTTGACACCAAGGGTCCAGAGATAAGAATAGGCTTTTTTAAGGATGGC
AAAGTAGAACTAAAAGAGGGCCAGAAATTTGCGCTGACTACGGAAGAAATCTTGGGAAATGAAGAAATTGTGAGTATAAC
TTATAAAGAACTTGTTGAGGATGTGAAACCAGGTGATAAAATCCTGATAGATGATGGACTTATTGAGCTTATTGTTGAGG
ACAAGACAGAAAAGAATATAATCTGCAAGGTAAAAAATGGAGGAGTTTTAACCAACCAGAAGGGGGTAAATGTACCGGGT
ATACCCATAAGACTTCCTGCACTTACCCAGAAGGATAAAGAGGATATTCTGTTCGGAATAGAAAACGATGTAGATTTTAT
TGCAGCCTCATTTATAAGAAAGGCAAGTGACGTTGTTGAAATCAGAGAGTTTCTGAACAAAAATGGTGGAAAGGACATTT
TAATAATTGCCAAGATAGAAACTCAAGAAGGTGTTGCCAACTGCGACGAAATAATAAGGGTTGCAGATGGAATTATGGTT
GCAAGAGGAGATTTAGGGGTAGAACTTCCTTTTGAGGAAGTTCCCCTTGTTCAAAAGATGCTGATTGAGAAGTGTTACAA
AGCAGGAAAGCCTGTTATAACAGCAACCCAGATGCTTGAATCTATGATACGAAATCCAAGACCTACCAGGGCAGAGGTTA
GCGATATTGCCAATGCCATATTTGATGGCACTTCTGCCATAATGCTCTCTGGCGAGACAGCAATGGGCAAGTATCCCGTT
GAAAGTGTTGCTACAATGGCAAAGATTGCCGAGAGGGTGGAAAATCAGATTGATTATATCAAGAGATTTCAGTCTCAGGT
ATTTGATATGCCTGTTAATGTGACAAATGCTATTTCGCACGCAACTTGTACAACTGCGCATGATCTTGGTGCAAAGGCTA
TTATAACTGTAACAAAGTCAGGTAACACTGCAAGAATGGTTTCGAAATTTAGACCTGCTTGTCCGATTATTGCAACCACA
CCTTGTGAGAAGGTAAGAAGACAGTTGAATCTGTCATGGGGTGTGTATCCATTTTTGGCAGAGTATAAAAGCTCAACCGA
TGACATATTTGACCATGCTGTTGAAATAGCTGTGAAATCCAAGATTGTAAAAAATGGAGATTTAGTTGTTATCACTGCCG
GTGTTCCTGTTGGTGTTAGTGGAACAACAAATATACTTAAAGTTCACGTTGTAGGACATGTTCTGGTTGAAGGGCGTGGC
TGGGGAAGTGGAAAAGTAACAAGCAGGGTCTGTGTTGTAAAAACCATTAATGATTTAAAGCTGAATTTTGAAGATGGAGA
TATTATTGTTACAAATCAAACAAATAACGAGTTTATACCATATATGAAAAGAGCATCTGGAATTATCACAGAAGAAGGTG
GACAGAACTCTCATGCTGTAATTGTAGGTGCTGCACTTGATATTCCTGTAATTACAGATGCCAAAAATGCACTGGAAATA
CTAAAAACAGGAATTGTAGTTACGATTGATACTCAAAAGGGTATTGTATTTAGTGGAGAACAGAAAATATAA

Protein sequence :
MRKTKIICTLGPASDSEEIIRKLVENGMDVVRLNFSHGTHEEHKKKIDMVKKIREELDKPIPILLDTKGPEIRIGFFKDG
KVELKEGQKFALTTEEILGNEEIVSITYKELVEDVKPGDKILIDDGLIELIVEDKTEKNIICKVKNGGVLTNQKGVNVPG
IPIRLPALTQKDKEDILFGIENDVDFIAASFIRKASDVVEIREFLNKNGGKDILIIAKIETQEGVANCDEIIRVADGIMV
ARGDLGVELPFEEVPLVQKMLIEKCYKAGKPVITATQMLESMIRNPRPTRAEVSDIANAIFDGTSAIMLSGETAMGKYPV
ESVATMAKIAERVENQIDYIKRFQSQVFDMPVNVTNAISHATCTTAHDLGAKAIITVTKSGNTARMVSKFRPACPIIATT
PCEKVRRQLNLSWGVYPFLAEYKSSTDDIFDHAVEIAVKSKIVKNGDLVVITAGVPVGVSGTTNILKVHVVGHVLVEGRG
WGSGKVTSRVCVVKTINDLKLNFEDGDIIVTNQTNNEFIPYMKRASGIITEEGGQNSHAVIVGAALDIPVITDAKNALEI
LKTGIVVTIDTQKGIVFSGEQKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 5e-106 51
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 2e-106 51
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 2e-106 51
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-105 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Calow_1057 YP_004002420.1 pyruvate kinase VFG0479 Protein 1e-106 51