Gene Information

Name : BBMN68_9 (BBMN68_9)
Accession : YP_003999623.1
Strain : Bifidobacterium longum BBMN68
Genome accession: NC_014656
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 7833 - 8909 bp
Length : 1077 bp
Strand : -
Note : Integrase, catalytic region

DNA sequence :
ATGGTGGCGAAGAGGGAACCGGAACGCGGGGATTCCTCGCAGCAGGACGATCCGGACGCGCTGCGCGGCGAGATCGCCAC
GTTGCGCGCCGACCTCGAGCGTCTGCGCGCCGAACAGCGGGCCATGGAGATCCGGTTGGCGATCATGAAGGGTGCGGCGG
AACTGGTGGGAAAAGAGCCGGGCGCAGACCCGGACAACCTGACAAGCCGAGAGAAGACGACCCTGATCAAGGACATCAGT
GAGACGTTGGGCGTGAACGCGGAGAGCCTGCTGAAGGAGGTCGGCATCGCGCGCAGCACGTACTACTACCAGTTGAAGGC
CATGCGCCGGCCGGACAAGAACGCGAACCTCCTGTCCCTGGTGCGCGAGGCGTTCGGGAGCAGCAGGAGGCGTTACGGGT
ACAAGCGCATCCACCTCGAGCTCAAAAGCGCGGGCATCATCGTGTCGGCCAAGCGCATCATGCGCCTGATGACCAGCCAC
GGCATGGTCCCCGTGCTCAAGAGCGCGAAGCGCTACAGTTCGTACAAGGGCGAGATCGGCGGCGCACCCGCGAATCTCGT
GAACCGCGACTTCCACGCCACCGCGCCGAACCGGCTGTGGGTCACGGACATCACCGAGTTCTCGATCCCGGCGGGCAAGG
TGTACCTGTCGCCGGTCATCGACTGCCATGACGGCATGCCCGTCGCCTGGACGATCGGCACGAGCCCCAACGCCGCCCTG
GCCAACGGCATGCTTCGCGACGCGTGCGCCACGCCCAGGCCCGGCGAGACGCCGATCATCCACTCGGACAGGGGTTGCCA
TTACCGGTGGCCGGAATGGATCCGCATCTGCACCGAGCACGGGCTGACCCGGTCGATGAGCGCGAAGGGCTGTTCGCCGG
ACAATGCGGCCGCGGAGGGGTTCTTCGGCCGTCTCAAGCAGGAGTTCTTCCACAAGAGGAGCTTCCGGGGCGTGACGATC
GACGAGTTCACCGCGATGCTCGACGAGTACATGGTCTGGTACCGCGACAAGCGCATCAAGACCGAATACGGCATGAGCAT
CATGGACAAACGCATCCAGCTCGGGCTCGTCGTCTGA

Protein sequence :
MVAKREPERGDSSQQDDPDALRGEIATLRADLERLRAEQRAMEIRLAIMKGAAELVGKEPGADPDNLTSREKTTLIKDIS
ETLGVNAESLLKEVGIARSTYYYQLKAMRRPDKNANLLSLVREAFGSSRRRYGYKRIHLELKSAGIIVSAKRIMRLMTSH
GMVPVLKSAKRYSSYKGEIGGAPANLVNRDFHATAPNRLWVTDITEFSIPAGKVYLSPVIDCHDGMPVAWTIGTSPNAAL
ANGMLRDACATPRPGETPIIHSDRGCHYRWPEWIRICTEHGLTRSMSAKGCSPDNAAAEGFFGRLKQEFFHKRSFRGVTI
DEFTAMLDEYMVWYRDKRIKTEYGMSIMDKRIQLGLVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CD241_0051 YP_005124320.1 transposase-like protein Not tested Not named Protein 3e-47 46
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 4e-43 41