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Name : clpA1 (BBMN68_52) Accession : YP_003999666.1 Strain : Bifidobacterium longum BBMN68 Genome accession: NC_014656 Putative virulence/resistance : Virulence Product : clpa1 Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 52709 - 55318 bp Length : 2610 bp Strand : + Note : ATP-binding subunit of Clp protease DNA sequence : ATGTTCGAACGGTTTACCGACCGTGCACGGCGCGTGATCGTGTTGGCGCAGGAAGAGGCGAGGGCCCTTCAGCACAACTA CATCGGCACCGAACACCTGCTGCTCGGCCTGATCCGCGAAGGTGAGGGTGTAGCCGCCAAGGCACTCGCCTCGAAGGGCG TGGAGCTGGATGCCACCCGCAAGCAGGTTGAAGAAATGATCGGCAAGGGCAACGCGGCTCCGAACGGGCACATCCCCTTT ACTCCGCACGCCAAGCAGGTGTTGGAGTTTTCGCTGCGTGAAGCCCTGCAGCTGGGCCACAGCTACATCGGCACCGAGCA CATCCTGCTCGGCCTGATTCGCGAAGGCGAAGGCGTGGGCACCCAGGTGCTCATCAAGATGGACGTCGATCTGGGCGAGT TGCGTAGCGCGACCATCGATATGATTCGCGGCAACTCCGGCACCGGCACCGGTGACGGCAAGGGCGACTTGGCCAACGCC GGCGGCGTGACGGACAAGCAGAACAAGTCCGGTTCCGCCATTCTCGATCAGTTCGGCCGCAACCTGACCGCCGAAGCCGC TGAAGGCAAGCTGGACCCGGTCATCGGCCGTACCAACGAGATTGAGCGCGTTATGGTCGTGCTTTCCCGCCGCACCAAGA ACAACCCGGTGCTGATCGGCGAGCCCGGCGTGGGCAAGACCGCTGTGGTCGAAGGCTTGGCCCAGAAGATCCAAGCCGGC GACGTGCCGGAAACCCTGAAGGGCAAGCAGGTCTACTCGCTGGACCTCGGTTCCATGGTGGCCGGCTCCCGCTACCGTGG TGATTTCGAGGAGCGCCTGAAGAAGGTGCTGAAGGAAATCAAGACCCGTGGTGATATCGTGCTGTTCATCGACGAGATCC ACACCATCGTGGGCGCCGGCTCGGCTGACGGCGCGCTGGGTGCCTCCGACATGTTGAAGCCGATGCTGGCCCGTGGCGAG CTCCAGACCATTGGTGCCACCACCACCGACGAGTACCGCAAGTACATCGAGAAGGACGCGGCTCTGGAACGCCGTTTCCA GCCGATTCAGGTGCACGAGCCGACCATCGCCGAGACCATCGAGATCCTGAAGGGCCTGCGTTCCCGTTACGAGAACCACC ACCACGTGACCATCACCGATGGCGCGCTGCAGTCCGCCGCAGAGCTGTCTAGCCGGTACATCCAGGACCGTAATCTGCCT GACAAGGCCATCGACCTGATCGATGAGGCCGGTGCACGCCTGCGCATCAAGCGCCTGACCGCCCCGCCTGAGCTCAAGGA ACTCGACGAGAAGATCGCCAAGATCGCCGCCGACAAGGACGAGGCCATCAAGGGCCAGGACTTCGAGAAGGCCGCCGAAC TGCGCGACAAGCAGGAGAAGCTGGAAGCCGATCGCAAGCAGAAGGAAGACTCCTGGCGCGAAGGCGAGTCCGACGTCAAG ATGGTCGTGGACGAGGACGTGATCGCCGAGGTCATCAGCTCCACCACCGGTATCCCGGTGTTCAAGCTGACTCAGGCCGA GTCCAAGAAACTGCTCAACATGGAAGCCGAACTGCACAAGCGCATCATCGGCCAGGACGAGGCGGTTTCCGCCCTGTCCC GCTCTATCCGCCGTACTCGCGTGGGTCTGAAGGACCCGAAGCGCCCGTCCGGCTCGTTCATCTTCGCCGGCCCCACCGGC GTCGGCAAGACCGAGCTGGCCAAGACGCTCGCCGAATTCCTGTTCGACGATGAGGACGCGCTGATTCGCGTGGATATGTC CGAGTTCTCCGAGAAGTACGCGGCTTCGCGACTCTTCGGTGCGCCTCCGGGATACGTCGGCTACGAGGAAGGCGGCGAGC TCACCGAAAAGGTGCGCCGCAAGCCGTTCTCCGTGGTGCTGTTCGACGAGATCGAAAAGGCTCATCCGGACATCTTCAAC ACGTTGCTGCAGGTGCTCGATGACGGCCACCTGACCGACGGTCAGGGCCGCAAGGTGGACTTTAAGAACACCATCATCAT CCTGACCACCAACCTCGGTACGCGAGACATCGCCAAGGCCGCCAACACGGGCTTCAACCTAGGTGCCAACAACGAGTCCA GCTACCAGCGCATGAAGGACCAGGTCAGCTCCGAATTGAAGCAGCAGTTCCGCCCGGAGTTCCTGAACCGTCTGGACGAC ATCATCGTCTTCAAGCAGCTCACCGAGCCGCAGGTGCGCCAGATCGTGGATCTGGACGTCAAGCAGCTCAACGACCGCCT GTTCGACCGTCATATGTCGCTCGAACTCACCGACGCCGCCAAGGACCTGCTCGCGCAGAAGGGCTTCGACCCGCTGCTCG GTGCCCGTCCGCTGCGCCGCGTGATTCAGCGCGACATCGAGGACGCCATCTCCGAGAAGATCCTGATGGGCGATCTCGAA GACGGTCAGCGCGTGATTGTGGATGCGGAAGGCGAGGGTATCCTCGGCGAATTCACCTTCAAGGGTGAGGAGTTCGAGGA GCCGGCCGCCGCCGATAGGCCCGCCGAAGACGGTGCCGCCACTGATGGCGAGACTCCAGCCGACGCCACTCCGGCCACTG AACCGGCCGAATCCGCTCCCGCCGATTCCGGTGACGCTCCGCAGGAGTAG Protein sequence : MFERFTDRARRVIVLAQEEARALQHNYIGTEHLLLGLIREGEGVAAKALASKGVELDATRKQVEEMIGKGNAAPNGHIPF TPHAKQVLEFSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMDVDLGELRSATIDMIRGNSGTGTGDGKGDLANA GGVTDKQNKSGSAILDQFGRNLTAEAAEGKLDPVIGRTNEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIQAG DVPETLKGKQVYSLDLGSMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGE LQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTITDGALQSAAELSSRYIQDRNLP DKAIDLIDEAGARLRIKRLTAPPELKELDEKIAKIAADKDEAIKGQDFEKAAELRDKQEKLEADRKQKEDSWREGESDVK MVVDEDVIAEVISSTTGIPVFKLTQAESKKLLNMEAELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPSGSFIFAGPTG VGKTELAKTLAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFN TLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAANTGFNLGANNESSYQRMKDQVSSELKQQFRPEFLNRLDD IIVFKQLTEPQVRQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAISEKILMGDLE DGQRVIVDAEGEGILGEFTFKGEEFEEPAAADRPAEDGAATDGETPADATPATEPAESAPADSGDAPQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 67 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpA1 | YP_003999666.1 | clpa1 | VFG0079 | Protein | 0.0 | 57 |
| clpA1 | YP_003999666.1 | clpa1 | VFG0080 | Protein | 3e-135 | 51 |
