Gene Information

Name : oppA1 (BBMN68_277)
Accession : YP_003999891.1
Strain : Bifidobacterium longum BBMN68
Genome accession: NC_014656
Putative virulence/resistance : Unknown
Product : oppa1
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG4166
EC number : -
Position : 333596 - 335236 bp
Length : 1641 bp
Strand : +
Note : ABC-type oligopeptide transport system periplasmic component

DNA sequence :
ATGAAGAAGAAAGCTCTTGCTTTCGCTGCCATGGCTTGCTCCGTGGCCATGCTGCTGAGCGCCTGCGGCGGCTCCAACAG
TAACGCTGCCTCCGGTGACACCGCTGGCTCCAACATCATCACTGCGTACAACTCCGAACCGCAGAACCCGCTGATCCCGG
GCAACACCAACGAGACCGGTGGCGGCAAGCCGGGTGACCTGCTGTTCTCCCGTCTGGTCTCCTTCGACAAGGATGGCAAG
GCTTCCAACGAAGTGGCCGAGTCCATCACCCCGAACGATGACGCCACCCAGTACACCATCAAGATCAAGTCCGGCTGGAA
GTTCACCGACGGCACCCCGGTGACCGCCGAGTCCTTCACCAAGGCCTGGTCCTACGTGGCCAACGTCAAGAACGCCCAGA
AGTGTTCCTCCTTCTTCTCCACCATCAAGGGCTACGATGAGCTCCAGGCTGATGGTCTGAAGGGTGACGAGCAGCTCTCC
GGCCTCAAGGTCGTGGACGACACCACCTTCACCGTTGACCTGAACCAGTCCGACTCCGTGTTCCCGATCAAGGTCGGCTA
CCTGGCCTTTGCCCCGCTGCCTGAGTCCTTCTACAAGGATCCGAAGGCCTTCGGCGAGAAGCCTGTCTCCAATGGCCCGT
ACAAGCTGGACCACTGGGACCACAACAAGGAAATCGCCCTCGTCAAGAACCCTGACTACAAGGGTAACGAGCAGCCCAAG
AACGACGGTGTGACCTTCAAGGTCTACACCGACGACTCCGCCGCCTACCGCGACATTCAGGGCGGCAACCTCGACGTGAT
GGATTCCGTCCCGGCCGCCTTCACCAAGACCTTCAAGACTGACAAGAAGGTCCAGGCTTACTCCGAGGCCGGCTCCGTTA
TCCAGACCTTCACCATCCCGTCCTCCCTTGACCACTTCAAGAACGACGAGGAAGGCCAGCTGCGTCGTCAGGCCATCTCC
ATGGCCATCAACCGTGACCAGCTCATCGACAAGGTGCTCAACGGCAACGCCACCGCCGCCACCGAGTTCACCTCCCCGAA
GACCCCGGGCTACTCTGACTCCCTCAAGGGTGCCGACAACCTGAAGTTCAACGCCTCCAAGGCCAAGGAACTGTGGGCCA
AGGCTGACGCCATCTCCAAGTACGACGGCCAGCTCACCTTCTCCTACAACGCCGATGGTGGTGCCAAGCCGATTTACGAT
GCTGTCGTGAACCAGCTCAAGAAGAACCTGGGCATCGACGCGGCCACCAACCCGATCCCGACCTTCCAGGAATTCCGTGA
CGCCGTCACCAACCGTCAGATGAAGGGCGCCTTCCGTACCGGCTGGCAGCCTGACTACCCGTCCGCCGAGAACTACCTGT
GGCAGCTGTACTCCACCGCTGCTGCTGATGGCAACGGCTCCAACGATGGTGACTACAAGAGCCCGGCCTTCGATGACCTG
TGCAAGCAGGCCGCTGCCGCTTCCAGCACTGATGACGCCAACAAGCTGTACCAGCAGGCTGAGGAGATCCTCCTCAACGA
CCTTCCGGCCATCCCGCTGTACTACTCCAACGCCTCCGGTGTGGCTTCCCTCAACGTGAAGTCCGGCTACGCCTTCGATT
GGCAGAACCTCCCGACCTACGCCGAGATGTCCAAGAAGTGA

Protein sequence :
MKKKALAFAAMACSVAMLLSACGGSNSNAASGDTAGSNIITAYNSEPQNPLIPGNTNETGGGKPGDLLFSRLVSFDKDGK
ASNEVAESITPNDDATQYTIKIKSGWKFTDGTPVTAESFTKAWSYVANVKNAQKCSSFFSTIKGYDELQADGLKGDEQLS
GLKVVDDTTFTVDLNQSDSVFPIKVGYLAFAPLPESFYKDPKAFGEKPVSNGPYKLDHWDHNKEIALVKNPDYKGNEQPK
NDGVTFKVYTDDSAAYRDIQGGNLDVMDSVPAAFTKTFKTDKKVQAYSEAGSVIQTFTIPSSLDHFKNDEEGQLRRQAIS
MAINRDQLIDKVLNGNATAATEFTSPKTPGYSDSLKGADNLKFNASKAKELWAKADAISKYDGQLTFSYNADGGAKPIYD
AVVNQLKKNLGIDAATNPIPTFQEFRDAVTNRQMKGAFRTGWQPDYPSAENYLWQLYSTAAADGNGSNDGDYKSPAFDDL
CKQAAAASSTDDANKLYQQAEEILLNDLPAIPLYYSNASGVASLNVKSGYAFDWQNLPTYAEMSKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0922 YP_005160014.1 putative peptide transport system secreted protein Not tested Not named Protein 2e-112 50