|
Name : appF1 (BBMN68_239) Accession : YP_003999853.1 Strain : Bifidobacterium longum BBMN68 Genome accession: NC_014656 Putative virulence/resistance : Unknown Product : appf1 Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 287759 - 289468 bp Length : 1710 bp Strand : + Note : ABC-type peptide transport system ATPase component DNA sequence : ATGAGCGAAAACAACAAGAATCTCGCCGATATCAAGGACCTGTCCGTCTCCTTCATGACCGACGCCGGCTCCATCAAGGC CGTCGAGGACGTGAACTTCACCATTCCGCGCAAGACCGTGGTCGGCGTGGTCGGCGAATCCGGTTCCGGCAAGTCCGTGA CCGCGCGCTCCATCATCAAGCTGCTGCCGGAGACGGCCACCACCTCCGGTGCCGTCTACCTGTCCAAGCGCGATGGTTCC GATTCGCTGGACGTGCTCTCCCTGAGCGGCGAACAGCTGCGCGAAGTGCGTGGTTCCGAGGCCGCGATGGTGTTCCAGGA GCCCAATTCGGTGCTGAACCCGGTGTACACCATCGGCTGGCAGATTGAAGAGGGCCTGCGCGCCCACGGCATGAAGGACA AGAAGGAACTGCGCGCCAAGGCCATCAACATCCTGAAGAAGGTCGGCATCCCGGATGCCGAAACCCGCGTGGACTACTAC CCGCACCAGTTCTCCGGCGGCCAGAAGCAGCGCATCGTCATCGCCATGGCGTTGGTGCTGAACCCAGGTCTGATTCTGGC CGACGAGCCTACCACTGCCCTCGACGTGACCGTGCAAGCCGAAATTCTCGACCTGCTGCGCCTCGCCCGTGACGAGTTCG ACGCCTCCGTGCTCATCATCACCCACAACATGGGCGTGATCGCGGACATCGCCGATCAGGTGGTCGTCATGTACCGCGGC CACGTGGTCGAACAGGGCGACGTGGAGCAGATCTTCTACCATCCGAAGGACGACTACACCAAGCGACTGCTGGGTGCCGT GCCGCGCATCGGTCAGAAGCTGGTCGTGCGCGACCGCGAGGACAAGCCGATCGAGCGCAAGGCCGATTGGCGCGAACAGC CGATCGCCGTCGAGGCCAAGAACCTGACCATCACGTACCCGGGCCATCTCATGCAGCCCGACTTCAAGGCCGTGGACGGC GCGAACTTCACCATCCACCGCTCCGAAGTGCTGGGCCTGGTGGGCGAGTCCGGTTCCGGCAAGTCCACCACCGGCCGTGC CATCGCCGGCCTGCAGAAGGTGTCCGGCGGCTCCCTGAACGTGCTCGGCATCGAGATGAACGGCGTCAAGGAGCGTGACT TCAAGCCCAAGCGCGCGGACATTGGTTTCGTGTTCCAGGATCCGGGCTCCTCGTTCAACCCGCTGATGACCATCGCGGAG AATGTGGCCGAGCCGCTGCTCGTGCACCGCAAGTACGGTTCTGTGGCCGATGCCAAGAACTATGTGGGCGACCTGCTGGA GATGGTCCAGCTGCCGCGCGCCTACATGAACCGTTTCCCGCATGAGCTGTCCGGCGGCCAGCGCCAGAGGGCGTCTTTGG CGCGTGGTTTGGCGTTGAAGCCGTCGCTGCTGATCGCCGATGAGCCGACTTCTGCATTGGACGTGTCGGTGCAGGCCAAG GTGTTGGAGCTGTTCAAGCGACTGCAGGCGGAAATCGGCTTCGCGTGCCTGTTCATCACCCATGATTTGGCGGTGGTCGA CATGCTTGCCGACCGCATCATGGTGATGCATAAGGGCCAGATCGTGGAGCACGGCGATGCCGGCCAGATTATGCAGCACC CGGAGAACCCGTACACCAAGAAGCTGCTGGCCTCCCTGCCCGTGCCCGACCCGCGCGAACAGCAGCAACACCGCGCCCAC CTCCACGAGCTCCTAGCCCAAGAGGCGTAA Protein sequence : MSENNKNLADIKDLSVSFMTDAGSIKAVEDVNFTIPRKTVVGVVGESGSGKSVTARSIIKLLPETATTSGAVYLSKRDGS DSLDVLSLSGEQLREVRGSEAAMVFQEPNSVLNPVYTIGWQIEEGLRAHGMKDKKELRAKAINILKKVGIPDAETRVDYY PHQFSGGQKQRIVIAMALVLNPGLILADEPTTALDVTVQAEILDLLRLARDEFDASVLIITHNMGVIADIADQVVVMYRG HVVEQGDVEQIFYHPKDDYTKRLLGAVPRIGQKLVVRDREDKPIERKADWREQPIAVEAKNLTITYPGHLMQPDFKAVDG ANFTIHRSEVLGLVGESGSGKSTTGRAIAGLQKVSGGSLNVLGIEMNGVKERDFKPKRADIGFVFQDPGSSFNPLMTIAE NVAEPLLVHRKYGSVADAKNYVGDLLEMVQLPRAYMNRFPHELSGGQRQRASLARGLALKPSLLIADEPTSALDVSVQAK VLELFKRLQAEIGFACLFITHDLAVVDMLADRIMVMHKGQIVEHGDAGQIMQHPENPYTKKLLASLPVPDPREQQQHRAH LHELLAQEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-62 | 41 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-62 | 41 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 1e-62 | 41 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-62 | 41 |
