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Name : Lbys_0845 (Lbys_0845) Accession : YP_003996946.1 Strain : Leadbetterella byssophila DSM 17132 Genome accession: NC_014655 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 900359 - 901654 bp Length : 1296 bp Strand : - Note : COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR017476:IPR001732:IPR014026:IPR014027; KEGG: cpi:Cpin_4763 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisa DNA sequence : ATGGAGTTTAAGTATCATTTAGCCATTATCGGGCAGGGTTATGTAGGACTACCTCTAGCTATCGAATTTGCTCATCATTT CCCTGTTTTAGGATTTGATATCCAAGAAGAAAGAGTAAGAGAATTAAACGCTGGACAGGATAGAACCCTAGAGGCTGATT TGCCAAAATTGAAGCATGTTCTGCAATTGGGCAATAAAGAACCATGGGCAGAAGGCTATAGGGCCTCATCGTCACTCGAA GATCTGAAGAAGGCTAATGTCTTTATTGTTACTGTTCCTACTCCTATTGATACCTTTAATGCACCAGATCTTAAACCATT ACTTTCAGCCACAGAAATGCTGGGAAAAGTCCTTAAAAAGGGAGATATGGTTATTTATGAAAGTACAGTATTTCCGGGAT GTACGGAAGAAGAATGCGTACCTGTGTTAGAGAGAGAGTCGGGACTAAGGTATAATGTAGACTTTTATGTAGGTTATTCT CCGGAAAGGATAGTACCTGGCGACAAGGTTCACACTTTGACAAAGATCAAGAAAGTAACCTCAGGTTCAACCCCGGAGAT TGCCAAAAAAGTAGATGATCTGTATAAAAAGATTATAGAAGCAGGCACCCATTTGGCTCCATCTATCAAAGTAGCAGAAG CTTCAAAGGCCATTGAAAATGCACAAAGAGATATCAATATTTCTTTTGTCAATGAATTGGCATTGATTTTTGACCGGATA GGGATAGATACCCATGATGTGCTTGAAGCTGCGGGAACGAAATTCAACTTCCTCAAGTACCAACCGGGCCTGGTAGGCGG GCACTGTATCTCCGTGGATCCTTACTATCTGGCGCATAAAGCTACCCAATTGGGCTATCATCCAGCAGTAATTCTATCCG GACGCCGAGTAAATGATTCTGTGGCAGAGTTTGTAGCCTCAAAGGTGGTTAAATTAATGATAGAAAAGGATCTTCAAGTG AAAGGATCTAAAGCGCTGGTCTTAGGTTTTACCTTTAAGGAAAACTGTCCGGATGTGAGAAACACCAAGGTGATAGATGT TTATCATGAATTGAGAGAATATGGTCTAGAGGTAGATGTATATGATCCATGGGCAGATCAGGAAGAAGTAAAGCACGAAT ATGGACTTCAGCTTATAGAATCATTACCAGATGCCGCTACCTATAATTCCATTATATTGGCAGTTGCTCATAGGGAATTC CTGGAAATTGATTTGAATACGCTTAAAAAAGAAAAAGCCGTGATATTTGATATCAAGGCTTGTCTTCCACGAGAAATAGT GGACGGTAGATTATAA Protein sequence : MEFKYHLAIIGQGYVGLPLAIEFAHHFPVLGFDIQEERVRELNAGQDRTLEADLPKLKHVLQLGNKEPWAEGYRASSSLE DLKKANVFIVTVPTPIDTFNAPDLKPLLSATEMLGKVLKKGDMVIYESTVFPGCTEEECVPVLERESGLRYNVDFYVGYS PERIVPGDKVHTLTKIKKVTSGSTPEIAKKVDDLYKKIIEAGTHLAPSIKVAEASKAIENAQRDINISFVNELALIFDRI GIDTHDVLEAAGTKFNFLKYQPGLVGGHCISVDPYYLAHKATQLGYHPAVILSGRRVNDSVAEFVASKVVKLMIEKDLQV KGSKALVLGFTFKENCPDVRNTKVIDVYHELREYGLEVDVYDPWADQEEVKHEYGLQLIESLPDAATYNSIILAVAHREF LEIDLNTLKKEKAVIFDIKACLPREIVDGRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 4e-110 | 54 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 4e-110 | 54 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-102 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Lbys_0845 | YP_003996946.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 2e-110 | 54 |
