|
Name : Lbys_0711 (Lbys_0711) Accession : YP_003996826.1 Strain : Leadbetterella byssophila DSM 17132 Genome accession: NC_014655 Putative virulence/resistance : Unknown Product : alanine racemase Function : - COG functional category : R : General function prediction only COG ID : COG0325 EC number : - Position : 777922 - 778638 bp Length : 717 bp Strand : + Note : COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR011078:IPR001608; KEGG: coc:Coch_0906 alanine racemase domain protein; PFAM: alanine racemase domain protein; SPTR: Alanine racemase domain protein; PFAM: Alanine racemase, N-terminal domain; TIGRFA DNA sequence : ATGGCAGATATACTTCATAATTTACAAATTATTCAAAATAGAATTGATCTTGCCTGCGCAAAAGCAAATAGAAGCCGGGA AGAAGTAAGATTACTTTTGGCTACCAAAACGGTTACTGCGGATAGAATTCTTACCGCTATGCAGGCTGGCTACACCTTGA TCGCAGAAAACAAGGTTCAGGAAGTAAAGGAAAAGTTTGATGCTTTAAAGGATTTTTCTCATATTTCACATTTTATAGGC CATTTGCAGACCAATAAAATCAAAGACCTATTAAAATGCAATGTCTCCTGTATTCAGTCTTTAGATAGACTAGACCTGGC AGAGAAGTTGCAAAGCCGACTTGAAAAAGAAAACAAGGACATAGATGTTTTCATTCAAGTAAACACCTCAGAGGAGGAGA GTAAATTTGGCATACATCCGGATCAAGCGGAAGATTTAGTGCGAAGGGTAGCAGAACTAGATAGAATCAATATCAAAGGT TTGATGACCATAGGGCTATTTAGTGCAGATTTAGATAAAGTAAGGCTTTGTTATCAATTGTTGAATAGACTTAGGAAAGA GATTCAGGTACCTGGGGTGGAATTGAAGGAACTGTCTATGGGTATGAGCGGTGACCTGGAAATAGCTATAGAAGAAGGTG CCACTATAGTTCGAGTGGGTACAGCTATCTTTGGACAGAGAATCTATCCTGATTCTTATTATTGGAACGAAGGGTAA Protein sequence : MADILHNLQIIQNRIDLACAKANRSREEVRLLLATKTVTADRILTAMQAGYTLIAENKVQEVKEKFDALKDFSHISHFIG HLQTNKIKDLLKCNVSCIQSLDRLDLAEKLQSRLEKENKDIDVFIQVNTSEEESKFGIHPDQAEDLVRRVAELDRINIKG LMTIGLFSADLDKVRLCYQLLNRLRKEIQVPGVELKELSMGMSGDLEIAIEEGATIVRVGTAIFGQRIYPDSYYWNEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CpC231_1557 | YP_005683917.1 | Pyridoxal phosphate enzyme, YggS family | Not tested | PiCp 6 | Protein | 3e-28 | 41 |
| cpfrc_01564 | YP_003783964.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 3e-28 | 41 |
| CpI19_1562 | YP_005686005.1 | Pyridoxal phosphate enzyme, YggS family | Not tested | PiCp 6 | Protein | 3e-28 | 41 |
| Cp1002_1555 | YP_005681817.1 | Pyridoxal phosphate enzyme, YggS family | Not tested | PiCp 6 | Protein | 3e-28 | 41 |
