Gene Information

Name : Lbys_0509 (Lbys_0509)
Accession : YP_003996636.1
Strain : Leadbetterella byssophila DSM 17132
Genome accession: NC_014655
Putative virulence/resistance : Resistance
Product : rifampin ADP-ribosyl transferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 554912 - 555337 bp
Length : 426 bp
Strand : -
Note : KEGG: sli:Slin_3048 rifampin ADP-ribosyl transferase; SPTR: Rifampin ADP-ribosyl transferase; PFAM: DNA/RNA tunnel of bacterial DNA dependent RNA polymerase

DNA sequence : 
ATGGCTGGGAAGAAAATCCTTACCAAAATGAATGCAACTCCATTGGAACCCACCTACTTTCACGGGACAAAAGCACAATT
AAGTATTGGAGACTACATTACGCCAGGCCATAACTCCAATTATGGAACGGGTAAAGAAGCAAGTTATATCTACCTTTCGG
GAACATTAGATGCGGCCATCTGGGGAGCGGAGTTAGCCAAAGGAGAGGGAAAAGAAAGAATCTATTTGGTGGAAGCTACG
GGAGAACTGGAAGATGATCCTAATGTCACCAACAAGAGATTCTCTGGAAATCCCACCCTTTCATACAGGTCTACATCCCC
TTTTCTTGTAGTTGGGGAAGTGGGGGATTGGCTACCTCATCCTGCTGAGCAAGTCCAAGCCATGAAAGCGACCATATCCT
CTAAGACAGACGATGATATCTTGTAG

Protein sequence : 
MAGKKILTKMNATPLEPTYFHGTKAQLSIGDYITPGHNSNYGTGKEASYIYLSGTLDAAIWGAELAKGEGKERIYLVEAT
GELEDDPNVTNKRFSGNPTLSYRSTSPFLVVGEVGDWLPHPAEQVQAMKATISSKTDDDIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arr-2 CAJ77045.1 Rifampin ADP-ribosylating transferase Not tested AbaR1 Protein 1e-23 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lbys_0509 YP_003996636.1 rifampin ADP-ribosyl transferase AF001493.1.orf0.gene Protein 1e-29 53
Lbys_0509 YP_003996636.1 rifampin ADP-ribosyl transferase AL939114.1.orf1.gene Protein 6e-19 48
Lbys_0509 YP_003996636.1 rifampin ADP-ribosyl transferase FM897214.1.orf2.gene Protein 2e-26 48
Lbys_0509 YP_003996636.1 rifampin ADP-ribosyl transferase NC_010410.6003052.p0 Protein 4e-24 46