|
Name : Lbys_3133 (Lbys_3133) Accession : YP_003999147.1 Strain : Leadbetterella byssophila DSM 17132 Genome accession: NC_014655 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 3537240 - 3538019 bp Length : 780 bp Strand : + Note : COGs: COG2801 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: bcb:BCB4264_A4383 integrase core domain protein; PFAM: Integrase catalytic region; SPTR: Transposase; PFAM: Integrase core domain DNA sequence : ATGGCTAGAAGTAGCTTTTATTATCATCAACTCTGCAGTAAAAGCGACAAGTACCGTGAGCTAAAGGAGCTCATTAAATG CATTTATCATAAGCATAAAGGGCTTTATGGCTACAGAAGGATTACAGATGAGCTGCAAAAGCTAGGCCGGATCATCAACC ATAAAACGGTTTTAAAGTTGATGAGTTTATTGGGATTGAAGAGCTTGATTCGAAGGAAGAAATACCAGTCGTATCGGGGA GATCAAGGTAAAATAGCACCTCATATTTTACAACGTAACTTTAAAGCGGATCGGCCAAATCAGAAATGGGTAACAGACAT CACAGAATTTAAAGTTCGAGACAAAAAACTTTATCTGTCGCCGATAATGGATCTTTATAATCAAGAAATTATCAGTTATC AGTTAAGTGAACGTCCTAGTTTTGACCAAGTGGTAGATATGCTCAAAAAGGCATTCAAAAAGATCCCTACTAGTACCGAA CTACTGTTCCACTCTGACCAGGGATGGCAATATCAAATGAAACAATTCCAAGCTCTGCTTAAGAAAAAGGGAATTGTACA AAGCATGTCAAGAAAAGGAAATTGCCTAGACAATGCCATTATTGAAAATTTCTTTGGAACACTAAAAGCTGAAATGTTTT ACATCCAAAAAATCAATTCAATTGAAGAACTAAAAAAGGAAATCAAAAACTATATTTACTATTACAATCATGAAAGAATA AAGTCAAACCTAAAAAAAATGAGCCCGATTCAATATCGAACTCATTTCTCAGAAACTTAA Protein sequence : MARSSFYYHQLCSKSDKYRELKELIKCIYHKHKGLYGYRRITDELQKLGRIINHKTVLKLMSLLGLKSLIRRKKYQSYRG DQGKIAPHILQRNFKADRPNQKWVTDITEFKVRDKKLYLSPIMDLYNQEIISYQLSERPSFDQVVDMLKKAFKKIPTSTE LLFHSDQGWQYQMKQFQALLKKKGIVQSMSRKGNCLDNAIIENFFGTLKAEMFYIQKINSIEELKKEIKNYIYYYNHERI KSNLKKMSPIQYRTHFSET |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1088 | YP_853108.1 | transposase subunit | Not tested | PAI IV APEC-O1 | Protein | 1e-60 | 56 |
| EFAU085_00737 | YP_008394261.1 | ISEnfa3, transposase | Not tested | Not named | Protein | 3e-54 | 53 |
| SEQ_0791 | YP_002746129.1 | transposase | Not tested | ¥ÕSeq2 | Protein | 4e-45 | 51 |
| SEQ_1760 | YP_002746996.1 | transposase | Not tested | ¥ÕSeq3 | Protein | 4e-45 | 51 |
| CDBH8_0905 | YP_005159997.1 | transposase-like protein | Not tested | Not named | Protein | 2e-41 | 46 |
| CDCE8392_1982 | YP_005134513.1 | transposase-like protein | Not tested | Not named | Protein | 2e-42 | 46 |
