Gene Information

Name : Lbys_3133 (Lbys_3133)
Accession : YP_003999147.1
Strain : Leadbetterella byssophila DSM 17132
Genome accession: NC_014655
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3537240 - 3538019 bp
Length : 780 bp
Strand : +
Note : COGs: COG2801 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: bcb:BCB4264_A4383 integrase core domain protein; PFAM: Integrase catalytic region; SPTR: Transposase; PFAM: Integrase core domain

DNA sequence :
ATGGCTAGAAGTAGCTTTTATTATCATCAACTCTGCAGTAAAAGCGACAAGTACCGTGAGCTAAAGGAGCTCATTAAATG
CATTTATCATAAGCATAAAGGGCTTTATGGCTACAGAAGGATTACAGATGAGCTGCAAAAGCTAGGCCGGATCATCAACC
ATAAAACGGTTTTAAAGTTGATGAGTTTATTGGGATTGAAGAGCTTGATTCGAAGGAAGAAATACCAGTCGTATCGGGGA
GATCAAGGTAAAATAGCACCTCATATTTTACAACGTAACTTTAAAGCGGATCGGCCAAATCAGAAATGGGTAACAGACAT
CACAGAATTTAAAGTTCGAGACAAAAAACTTTATCTGTCGCCGATAATGGATCTTTATAATCAAGAAATTATCAGTTATC
AGTTAAGTGAACGTCCTAGTTTTGACCAAGTGGTAGATATGCTCAAAAAGGCATTCAAAAAGATCCCTACTAGTACCGAA
CTACTGTTCCACTCTGACCAGGGATGGCAATATCAAATGAAACAATTCCAAGCTCTGCTTAAGAAAAAGGGAATTGTACA
AAGCATGTCAAGAAAAGGAAATTGCCTAGACAATGCCATTATTGAAAATTTCTTTGGAACACTAAAAGCTGAAATGTTTT
ACATCCAAAAAATCAATTCAATTGAAGAACTAAAAAAGGAAATCAAAAACTATATTTACTATTACAATCATGAAAGAATA
AAGTCAAACCTAAAAAAAATGAGCCCGATTCAATATCGAACTCATTTCTCAGAAACTTAA

Protein sequence :
MARSSFYYHQLCSKSDKYRELKELIKCIYHKHKGLYGYRRITDELQKLGRIINHKTVLKLMSLLGLKSLIRRKKYQSYRG
DQGKIAPHILQRNFKADRPNQKWVTDITEFKVRDKKLYLSPIMDLYNQEIISYQLSERPSFDQVVDMLKKAFKKIPTSTE
LLFHSDQGWQYQMKQFQALLKKKGIVQSMSRKGNCLDNAIIENFFGTLKAEMFYIQKINSIEELKKEIKNYIYYYNHERI
KSNLKKMSPIQYRTHFSET

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 1e-60 56
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 3e-54 53
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 4e-45 51
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 4e-45 51
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 2e-42 46
CDBH8_0905 YP_005159997.1 transposase-like protein Not tested Not named Protein 2e-41 46