|
Name : Lbys_2943 (Lbys_2943) Accession : YP_003998958.1 Strain : Leadbetterella byssophila DSM 17132 Genome accession: NC_014655 Putative virulence/resistance : Unknown Product : d-xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : - Position : 3306619 - 3307950 bp Length : 1332 bp Strand : + Note : COGs: COG2115 Xylose isomerase; InterPro IPR012307:IPR001998:IPR013452; KEGG: phe:Phep_1604 xylose isomerase; PFAM: Xylose isomerase domaiN-containing protein TIM barrel; PRIAM: Xylose isomerase; SPTR: Xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xy DNA sequence : ATGGCTATTGTAACAGGAGATACAGAGTACTTCAAGGGTATTGGTGAGATTAAATATGAGGGAAAGGATACAGATAACCC TTTGGCCTTCCGCTACTATGATCCAAATAGAATAGTAAGAGGAAAAACCATGAAGGAACATTTGAAATTTGCCGGGGCCT ATTGGCACTCATTCAATGGCAATGGTTCAGATCCTTTTGGTGAACCTACGCATATTTTCCCTTGGGATGTAAAGCAAGAT CCCATAGTGAGAGCTAAAGATAAGATGGATGCTGCGTTTGAGTTTTTGACCAAAATGAATCTGCCTTATTACTGCTTCCA TGATGTAGATATGGTAGATTATGGTTCAGATGTTGCCGAAAATGAAAGGCGATTAGAGGCTCTAACTCAATATGCCCTGG AGAAACAAAAGGCTACAGGCGTGAAGTTGCTTTGGGGAACAGCAAACCTTTTCTCGAATAGGAGATACATGAATGGAGCC ATAACTAATCCGGATTTTCATGTTCTTACGCACGGAGCAGCACAAGTGAAAGCGGCCTTAGACGCTACTATCCAGTTAGG CGGAGAAAATTATGTATTCTGGGGAGGTAGAGAAGGCTATATGACTCTTTTGAATACAGACATGAAGAGAGAGAAAGAGC ATTTTGCCCGTTTCTTACATACTGTTAGAGATTATGCCAGAAAGAATGGATTTACAGGTACCTTCTTCATAGAACCTAAG CCATGTGAGCCTTCAAAACATCAATATGATTATGATGCGGAGACGGTGATAGGATTCTTGAGACAGTATGATCTATTATC CGACTTTAAACTTAACCTTGAAGTTAACCACGCTACTCTAGCAGGACATACCTTCCAGCATGAATTACAGGTGGCTGCTG ATGCCGGTCTACTAGGCTCTATAGATGCTAACAGAGGAGATTATCAGAACGGTTGGGATACGGATCAATTCCCTAATAAC ATCAATGAGCTTGTTGAATCCATGTTGATCATATTGGAAGCAGGTGGCTTCAAAGGGGGTGGAATCAATTTTGATGCGAA GATTAGAAGAAATTCTACGGATCAAGAGGATCTTTTTTATGCACATATCGGAGGAATGGATATATTTGCAAAAGCTCTGC TTTTAGCAGATGAAATTTTGGAAAAATCTGAATATTCCAAATTAAAGGCAAACCGTTATGCATCTTTTGATTCTGGACTA GGAAAAGCCTTCGAAGAAGGAAAATTAAGTCTGGAAGATTTAAGAAATTATGCAGCAGAAAATGGTGAGCCTAAGGTCAT CAGCGGGAAGCAGGAATACTTAGAGAATTTAATTAATCGATATATTTTCTAA Protein sequence : MAIVTGDTEYFKGIGEIKYEGKDTDNPLAFRYYDPNRIVRGKTMKEHLKFAGAYWHSFNGNGSDPFGEPTHIFPWDVKQD PIVRAKDKMDAAFEFLTKMNLPYYCFHDVDMVDYGSDVAENERRLEALTQYALEKQKATGVKLLWGTANLFSNRRYMNGA ITNPDFHVLTHGAAQVKAALDATIQLGGENYVFWGGREGYMTLLNTDMKREKEHFARFLHTVRDYARKNGFTGTFFIEPK PCEPSKHQYDYDAETVIGFLRQYDLLSDFKLNLEVNHATLAGHTFQHELQVAADAGLLGSIDANRGDYQNGWDTDQFPNN INELVESMLIILEAGGFKGGGINFDAKIRRNSTDQEDLFYAHIGGMDIFAKALLLADEILEKSEYSKLKANRYASFDSGL GKAFEEGKLSLEDLRNYAAENGEPKVISGKQEYLENLINRYIF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 6e-101 | 52 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 5e-101 | 52 |
