Gene Information

Name : Lbys_2777 (Lbys_2777)
Accession : YP_003998792.1
Strain : Leadbetterella byssophila DSM 17132
Genome accession: NC_014655
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase recg
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 3112766 - 3114859 bp
Length : 2094 bp
Strand : -
Note : COGs: COG1200 RecG-like helicase; InterProIPR014001:IPR001650:IPR014021:IPR004365:IPR 011545:IPR004609; KEGG: dfe:Dfer_4892 ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; heli

DNA sequence :
ATGGCATCCATTTTTGATACAAAGATTGAGTATTTAAAAGGCATAGGAGGCCCCAGAGCAGAATTATTAAATAAAGAGCT
GGGTATATTTACCTATGGTGACCTACTGGAACATTATCCTTTCAGATATGAAGATAGAACACGTTTCTACAAAATTTCTG
AACTAACGGATACCCTACCGGCAGCTCAATTGCTAGGTAAAATAAAAAGTGTTGAACTCGTAGGCGGAAAAGGTAAATCT
CGCCTGGTAGCTACTTTTAGTGATGGAGTAGCCTCCATGGAATTAGTGTGGTTTCAAGGTGTAAGTTATTTCCATAAAAT
CCTCCAAATAGGTGCTAATTATATTGTCTATGGGAAACCTTCCCTGTTTGGGGGAATTTTTTCTATTCAACATCCGGAGA
TTGAACTTTATAAGTCAGATCGGCCCCTCCCAAAGTACTTTCAGCCCATTTATCATCTTACAGATAAACTCAGAAAAAAG
TTTATTGAGAGTAAGACCTTTACCCAATGGTTCAGAACTTTACTCCCTCTGGTCCAAGAACATATACACGAAACCTTGCC
TGAGTTTCTATTGAAGAAATACAAGCTCGTTTCTAAAAAGGAAGCGTATTATTACCTACATTTACCAAGGTCTCCTTTAG
AGCAACTTCATGCTAATCGCCGACTGAAATTTGAGGAATTGTTCTATAATCAGATCAAACTGATATCCCTCTCTTTGGTA
AGAAAAAACGAGTATCCAGGGCAAGTTTTTAATAAGACCACCCTACTTACAAAGTTCTATCAGGATCACTTGCCCTTTGA
CCTTACAGGTGCACAAAAAAGGGTGATAAGAGAGATCTTTGGGGATCTTAAATCTGGTCGACAAATGAACCGACTTGTCC
AAGGAGATGTAGGAAGCGGGAAAACCATAGTAGCCTTTATATGTATGCTAATGGCCATTGATGGAGGGGCACAAGCCTGC
ATGATGGCACCTACAGAGATCCTTGCTCAACAGCATTTTTCGAACCTGAAGAAATTCGCTGATGCCTTAGAATTAGAAAT
CCGACTGCTAACGGGATCTAGCACAAAGAAAGAAAGAGAGGAGATACATCAAGGTTTGATAACTGGACAAATTCACATTT
TAGTAGGTACACATGCCGTATTGGAAGATGTGGTTCAATTTCAAAACCTTGGACTGTGTGTGATTGATGAGCAACACAGA
TTTGGCGTTGCTCAAAGAGCAAAACTCTGGGAAAAGAACAAAAAGCTTTATCCTCACATGCTGGTTATGACGGCCACTCC
CATACCCAGAACACTTGCCATGACCCTTTACGGGGATTTGGATATTTCTGAAATCGATGAACTTCCTCCCGGCAGAAAAC
CTATCAAAACAGTTCACAGATTTGAATCCAGTAGATTAGCCGTCTGGGGATTCATGAAGGAGGAATTAGCTAAGGGCAGG
CAAATATATGTAGTGTTCCCTCTGATTGAAGAATCTGAAAAATTAGATTTAAAGAATCTCTTTGACGGATACGAAAATAT
CCGTGCAGCCTTCCCCGAATTTGCAGTCAGCATAGTACACGGCAAAATGAAGCCAAAAGACAAAGAGTATGAGATGCAAA
GATTCAAGAAAGGAGAGACACAAATCATGGTGGCTACCACAGTAATTGAAGTAGGAGTAGATGTTCCTAATGCCAGTGTC
ATGGTCATTGAGAGTGCACATAGATTTGGGTTATCCCAATTACACCAATTAAGAGGAAGGGTAGGCCGAGGTGCTGAACA
ATCCTACTGCATCTTAATGACTGATTATAAACTATCTGCTGATACCAGAAAGAGAATGGAAACCATGGTGGAGTCAGAAA
ATGGATTCTATATTTCAAAGGTAGATCTTGAACTAAGAGGGCCAGGTGACCTGTCCGGCACCCAACAAAGTGGACTGGTA
GATCTAAAACTCGCTAACCTTGCAAAAGACGAAGAAATCCTAAAGATTGCCAGAGAAGAAGCATTTACTATACTCCAAAT
GGACCCCAGTCTAAGTATGCCTGAACATAAAGCTATACAAATGCATCTATCCAGAATCAGAAACAAGTCTTTAAGTTGGA
GCAAGATCTCTTAA

Protein sequence :
MASIFDTKIEYLKGIGGPRAELLNKELGIFTYGDLLEHYPFRYEDRTRFYKISELTDTLPAAQLLGKIKSVELVGGKGKS
RLVATFSDGVASMELVWFQGVSYFHKILQIGANYIVYGKPSLFGGIFSIQHPEIELYKSDRPLPKYFQPIYHLTDKLRKK
FIESKTFTQWFRTLLPLVQEHIHETLPEFLLKKYKLVSKKEAYYYLHLPRSPLEQLHANRRLKFEELFYNQIKLISLSLV
RKNEYPGQVFNKTTLLTKFYQDHLPFDLTGAQKRVIREIFGDLKSGRQMNRLVQGDVGSGKTIVAFICMLMAIDGGAQAC
MMAPTEILAQQHFSNLKKFADALELEIRLLTGSSTKKEREEIHQGLITGQIHILVGTHAVLEDVVQFQNLGLCVIDEQHR
FGVAQRAKLWEKNKKLYPHMLVMTATPIPRTLAMTLYGDLDISEIDELPPGRKPIKTVHRFESSRLAVWGFMKEELAKGR
QIYVVFPLIEESEKLDLKNLFDGYENIRAAFPEFAVSIVHGKMKPKDKEYEMQRFKKGETQIMVATTVIEVGVDVPNASV
MVIESAHRFGLSQLHQLRGRVGRGAEQSYCILMTDYKLSADTRKRMETMVESENGFYISKVDLELRGPGDLSGTQQSGLV
DLKLANLAKDEEILKIAREEAFTILQMDPSLSMPEHKAIQMHLSRIRNKSLSWSKIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 4e-94 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lbys_2777 YP_003998792.1 ATP-dependent DNA helicase recg BAC0356 Protein 5e-101 41