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Name : Lbys_2545 (Lbys_2545) Accession : YP_003998560.1 Strain : Leadbetterella byssophila DSM 17132 Genome accession: NC_014655 Putative virulence/resistance : Unknown Product : ssra-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 2823373 - 2823819 bp Length : 447 bp Strand : + Note : COGs: COG0691 tmRNA-binding protein; InterPro IPR020081:IPR000037; KEGG: dfe:Dfer_3480 SsrA-binding protein; PFAM: SmpB protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; TIGRFAM: SsrA-binding protein DNA sequence : ATGAAACTGCAAAAGACTGTAAACATAAAAAATAAGAAAGCTTCCTTTGAGTATTTCTTCCTGGACGAGTACACGGCCGG GATGGTGCTTACTGGGACTGAAATTAAATCCATCAGAGAAGCTAAGGTGAGCATGGCAGATGCCTATTGTATCTTCCATA GAGGTGAACTCTTTGTCAAAAACCTGAACATCTCTAAGTATGACAACGGGACGTACTATAATCATGACCCCCTTAGAGAA AGGAAACTTTTATTATCCAGGAAAGAATTACGGAAGTTAGAAGGCAAACTAACGGATAAAGGTTTGACCATCATACCTAC CCGTCTGTTTATAAACGACAGAGGATTAGCGAAGTTAGATATTGCCTTAGCAAAAGGTAAAAAGCTTTACGACAAAAGAG AGTCCATTAAAGAAAAGGATATCAAAAGAGATCAGGAAAGATTCTAG Protein sequence : MKLQKTVNIKNKKASFEYFFLDEYTAGMVLTGTEIKSIREAKVSMADAYCIFHRGELFVKNLNISKYDNGTYYNHDPLRE RKLLLSRKELRKLEGKLTDKGLTIIPTRLFINDRGLAKLDIALAKGKKLYDKRESIKEKDIKRDQERF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 4e-17 | 44 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 7e-14 | 44 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 2e-17 | 44 |
