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Name : Lbys_2055 (Lbys_2055) Accession : YP_003998104.1 Strain : Leadbetterella byssophila DSM 17132 Genome accession: NC_014655 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 2195088 - 2196359 bp Length : 1272 bp Strand : - Note : COGs: COG0172 Seryl-tRNA synthetase; InterProIPR018156:IPR002317:IPR015866:IPR002314:IPR 006195; KEGG: sli:Slin_5630 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; PRIAM: Serine--tRNA ligase; SP DNA sequence : ATGTTACAGATCAATTATATAAAAGATAATCTGGAAAGAACCATAGCAGGTTTGAAGAAGAAACACTTCAAAGATGCAGA GTTGGTGGTCCAGCAAGCCTTAGACGTGGATTCCCAAAGAAAGGATATTCAGGTGCGTCTAGATAATACTTTAGCGCAGG CCAATGGTTTGGCTAAAGAGATTGGGGGGCTGATGAAAGCCGGTCAAAAGGAAGAAGCTGAAAAGCTAAAGGCTCAAACT GCGGAATTGAAAGAGGTTTCTAAAGATTTAGAAGCAGCGCTTAAGAAGGCTGAAGATACGCTTCAGGAAATCTTGGTTAC TCTTCCTAACCTTCCGCATGAATCCGTTCCGGAAGGCCGTACTGCAGAAGATAACCTAGAAGTAGAGAAAGGAGGTACTG TGCCAGAACTTTCAGCTGATGCTTTACCTCACTGGGATCTGATAAAGAAATATGATATCATAGATTTTGAATTAGGTAAC AAAGTTAGTGGAGCCGGTTTCCCTTTCTACAAAGGTAAAGGGGCTAAGATTCAACGTGCTTTGATCAACTTCTTCTTAAA TGAAGCAGAGAAGGCGGGGTACTTTGAAGTCCAACCGCCAATAGTCATCAATGCAGCATCCGGTTTTGGAACGGGTCAAT TACCTGACAAGGAAGGTCAGATGTATCATGCTACGGCTGATGATTTATACCTGATCCCTACGGCTGAGGTACCGGTTACT AACATGTACAGAGATGTAATCCTCTCTGAAAATGAGCTTCCAAAGAAAAACGTTGCCTATACTCCTTGCTTTAGAAGAGA GGCAGGAAGCTGGGGTGCTCATGTACGCGGTTTGAACCGTCTTCATCAGTTTGATAAAGTGGAAATCGTTCAAATTACCA CTCCTGAGAAATCTTATGATGCTTTAGAAGAGATGCTAAATCATGTAAGAGGTCTATTGGAAAAGCTGCAATTGCCTTAT AGAATCTTGAAATTATGTGGTGGAGACATGAGCTTTACTTCTGCCTTAACGTATGATTTCGAAGTGTATTCTGCAGCCCA ACAACGTTGGCTCGAAGTGAGTTCTGTGTCTAACTTCGAGACTTATCAAGCAAATAGATTGAAGTTGAGGTATAAGGTGG ATGGCAAATCCCAGTTGCTACATACTCTTAACGGTTCAGCATTAGCGTTGCCAAGGATATTGGCCGCTATTTTGGAAAAT AACCAAAGTCCTTCAGGAATAAAGGTGCCGGAAGTTTTACAAGCTTTCTGCGGTTTTGACAAGATAGATTAA Protein sequence : MLQINYIKDNLERTIAGLKKKHFKDAELVVQQALDVDSQRKDIQVRLDNTLAQANGLAKEIGGLMKAGQKEEAEKLKAQT AELKEVSKDLEAALKKAEDTLQEILVTLPNLPHESVPEGRTAEDNLEVEKGGTVPELSADALPHWDLIKKYDIIDFELGN KVSGAGFPFYKGKGAKIQRALINFFLNEAEKAGYFEVQPPIVINAASGFGTGQLPDKEGQMYHATADDLYLIPTAEVPVT NMYRDVILSENELPKKNVAYTPCFRREAGSWGAHVRGLNRLHQFDKVEIVQITTPEKSYDALEEMLNHVRGLLEKLQLPY RILKLCGGDMSFTSALTYDFEVYSAAQQRWLEVSSVSNFETYQANRLKLRYKVDGKSQLLHTLNGSALALPRILAAILEN NQSPSGIKVPEVLQAFCGFDKID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-68 | 44 |
