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Name : Lbys_1978 (Lbys_1978) Accession : YP_003998027.1 Strain : Leadbetterella byssophila DSM 17132 Genome accession: NC_014655 Putative virulence/resistance : Virulence Product : RNA-directed DNA polymerase (reverse transcriptase) Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3344 EC number : - Position : 2098774 - 2100006 bp Length : 1233 bp Strand : - Note : COGs: COG3344 RetroN-type reverse transcriptase; InterPro IPR000123:IPR000477:IPR013597; KEGG: zpr:ZPR_3982 RNA-directed DNA polymerase (reverse transcriptase); PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific d DNA sequence : ATGATTGATTACTATGAAACAAAGCAACATCCAATCACCAAGAAAATGGTGTTGGATGCTTACCGAAAAGTACGGGCAAA TAAGGGGAGTGCCGGGATTGATACGCAGAGTCTGGAACAGTTTGAGGAACGGTTAGCGGATAATCTATATAAGATCTGGA ACCGTATGACCTCGGGCAGTTACCATCCCAAAGCAGTAAGGGAGGTGCAAATTCCCAAGAAAAGTGGAGGTTATCGAGGA CTCGGAATACCTACGGTGTCAGACCGGGTAGCCCAACAGGTTGTCAAAAGCTATCTTGAACCCAAGGTGGAGCCGAGCTT CCATCAGGACAGCTACGGTTATCGTCCGAACAAGAGTGCGCATGATGCGCTGGCTAAAACGGTGCGGAACTGTGGGTACT ACAGCTGGGTTGTGGACCTGGACATCCGTGGCTTCTTCGATAACATCGATCACGAACTACTCATGAAAGCCGTGCGTGTA TATACCGACGAGAAATGGATAATCATGTACATCGAACGCTGGCTTGAAGTGGGCGTAGTGCGTGAGGGTAAAGTGCACAA ACGAGAAAAAGGGACACCTCAGGGTGGAGTGATAAGTCCCCTGCTGGCCAACATCTTCCTGCACTTCGTTTTCGACAAAT GGATGGAAAAGCATCACGGCAATATGCCTTTTGAAAGGTATTGCGATGACGCCATCATCCACTGTACCACTTGGAATCAG GCTGTATTTATCAAGAATGCGGTAACCAAGCGTATGAAGGAGTGCAAACTTGAACTCAACAGCGAGAAAACAAAAATCGT ATACTGCAAAAACTCGATCCACAGAGAGTCAAATCCAGTACCGGTTTCGTTCACCTTCCTTGGTCATACATTTCGACCCT TGGGCAGGCCAACCAAAAACGGCTGGAAACTTACGTATTTTCCGTGTATGAGTCAGGATGCGAAGAAATCCGTTCGAGAG AAAGTGAAGAGTGTAGTGAACAGGCGTTTCATGGGAAAGCTGCAAGACATCGCCCAACGCCTGAACGCAATGGCCAGAGG TTGGATTAATTACTACTGTGTGTATTCAAGATGGACGGTGTACGGACTTTGGTATTGGATTAACCTCAAGTTGGTACGAT GGGTTATGAGACGTAAAAAGATGGGAAGAAGGAGAGCACATCAGTGGTTGAGGAAAATCTATAACCAGAACCCAAAACTA TTCATCCACTGGACGCTTGCCAGACCGTACTAA Protein sequence : MIDYYETKQHPITKKMVLDAYRKVRANKGSAGIDTQSLEQFEERLADNLYKIWNRMTSGSYHPKAVREVQIPKKSGGYRG LGIPTVSDRVAQQVVKSYLEPKVEPSFHQDSYGYRPNKSAHDALAKTVRNCGYYSWVVDLDIRGFFDNIDHELLMKAVRV YTDEKWIIMYIERWLEVGVVREGKVHKREKGTPQGGVISPLLANIFLHFVFDKWMEKHHGNMPFERYCDDAIIHCTTWNQ AVFIKNAVTKRMKECKLELNSEKTKIVYCKNSIHRESNPVPVSFTFLGHTFRPLGRPTKNGWKLTYFPCMSQDAKKSVRE KVKSVVNRRFMGKLQDIAQRLNAMARGWINYYCVYSRWTVYGLWYWINLKLVRWVMRRKKMGRRRAHQWLRKIYNQNPKL FIHWTLARPY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13526.1 | reverse transcriptase | Not tested | PAGI-7 | Protein | 3e-82 | 48 |
| unnamed | CAD33771.1 | putative reverse transcriptase | Not tested | PAI I 536 | Protein | 1e-71 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Lbys_1978 | YP_003998027.1 | RNA-directed DNA polymerase (reverse transcriptase) | VFG1512 | Protein | 6e-72 | 43 |
