Gene Information

Name : Lbys_1597 (Lbys_1597)
Accession : YP_003997658.1
Strain : Leadbetterella byssophila DSM 17132
Genome accession: NC_014655
Putative virulence/resistance : Unknown
Product : aminotransferase class i and ii
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : -
Position : 1660096 - 1661301 bp
Length : 1206 bp
Strand : -
Note : COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839:IPR001176; KEGG: sli:Slin_1914 aminotransferase class I and II; PFAM: aminotransferase class I and II; SPTR: Aminotransferase class I and II; PFAM: Aminotransferase class I and

DNA sequence :
ATGGAGATCTTAAAAAGTGAAAGACTAAATAACCTTTCTTATGCTATACGCGGCCCTATTTATGATAAGGCTTTGCAAAT
GGAACAGGAGGGACACACTATATTAAAACTGAATATTGGAAACCCGGCTCCATTTGGATTTGAGGTGCCTCAAGTCATGA
AAGAAGCCATGCGCCAGCAATTAGATCATGCTGAGGGCTATTCTCATCATTTGGGAATAATGGAGGTTAGAGAAGCTATA
GCAAAAGACTATACGGCGAGAGGTTTTCAAGGGATTAAGTCAGAAGAAATATTTATAGGAAATGGTGTAAGCGAGCTGAT
CATCATGTGTATGCAAGCTTTGCTTAATCCGGGAGATGAGGTTTTAGTGCCTTCTCCAGACTATCCTTTATGGACTGCGG
CGGTGGGCTTCGGCGGAGGTAAAGCCGTACATTACGTATGTGATGAAGCAGATGAATGGAATCCTGACGTGGCAGATATG
GAGAAGAAGATTAACTCCAAGACGAAAGCTATTGTCATCATTAATCCTAATAACCCCACTGGAGCTGTATATAAGAAGGA
CATACTTCAAAAGATAGTAGATCTTGCGGAGAAGTATAATCTTGTACTATTCTCTGATGAGATATATGACAAAATCTTGT
ACGATGGACTTCAGCATATTCCTGTGGCTACATTGTCTGACCAGGTACACTGCATCACTTTTGGAGGTTTGTCTAAGAAC
TATTTTGCTTGCGGATTTAGGGGAGGCTGGATGATTCCTACGGGCAAGAGATCAAAATCTTTCTTAGAGGGCATGAACCT
ATTGGCCTCTATGCGTCTTTGTCCTAATGTACCCACTCAGTATACTATTGCTGCGGCTTTACAGGATGACAGCGTAGTGA
AAGGAATGATACAGCCGGGTGGAAGATTATACGAGCAAAGTAAATTGGTTCAGGAGAAAGTTTCTCAAATTGAAGGTTTA
AGTTGCGTGGCTCCTAAGGGTTCACTGTACTGTTTCCCGAAAATTGACCTTTCTCAATTTACTTTCAAAGATGATGTAGA
ATTTACATACGGTCTATTGACAGAGCAAAAAGTGCTAGTGATAGCCGGTAGTGGTTTTAATTTTATAGATAATGCACACT
TCCGCATCGTATTCCTTCCTGATGTTGAAGTTTTAGCTGATGCCACGGATAGAATTGGGGCGTATTTAGACAGTAAAAGA
AAGTAA

Protein sequence :
MEILKSERLNNLSYAIRGPIYDKALQMEQEGHTILKLNIGNPAPFGFEVPQVMKEAMRQQLDHAEGYSHHLGIMEVREAI
AKDYTARGFQGIKSEEIFIGNGVSELIIMCMQALLNPGDEVLVPSPDYPLWTAAVGFGGGKAVHYVCDEADEWNPDVADM
EKKINSKTKAIVIINPNNPTGAVYKKDILQKIVDLAEKYNLVLFSDEIYDKILYDGLQHIPVATLSDQVHCITFGGLSKN
YFACGFRGGWMIPTGKRSKSFLEGMNLLASMRLCPNVPTQYTIAAALQDDSVVKGMIQPGGRLYEQSKLVQEKVSQIEGL
SCVAPKGSLYCFPKIDLSQFTFKDDVEFTYGLLTEQKVLVIAGSGFNFIDNAHFRIVFLPDVEVLADATDRIGAYLDSKR
K

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 5e-102 50
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 5e-102 50
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 5e-102 50
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 5e-102 50