Gene Information

Name : Halsa_0060 (Halsa_0060)
Accession : YP_003993910.1
Strain : Halanaerobium hydrogeniformans sapolanicus
Genome accession: NC_014654
Putative virulence/resistance : Virulence
Product : NAD-dependent epimerase/dehydratase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 74508 - 75521 bp
Length : 1014 bp
Strand : +
Note : PFAM: NAD-dependent epimerase/dehydratase; KEGG: dal:Dalk_1699 NAD-dependent epimerase/dehydratase

DNA sequence :
ATGTCAAAAACACATTTAGTTACTGGAGCTGCAGGCTTTATCGGTTTCCATACAAGTAAGAAGTTACTGGAAGAAGGTCA
GCAGGTAATCGGCCTTGATAATCTCAATGATTATTATTCTGTTCAGTTAAAAAAGGATAGGCTGGCTATCTTAAAAGAAT
ATGATAATTTCATATTTATCAAAGGTGATTTAGAGAATAATAAACTGGTTGCAAATACATTTGCGAAATATAAGCCTGAA
ATAGTTATTAACCTGGCTGCTCAGGCAGGGGTTCGCTATAGTCTTAAAAACCCTCATTCCTATATAGATTCTAACCTTGT
TGGTTTTATGAATATACTTGAAGGTTGTCGCCATCATGATGTTGAGCATCTTATTTTTGCTTCATCCAGTTCTGTATATG
GCTCAAATGAAAAGGTGCCATTCTCAACGACGGATAATGTCGATCATCCAGTAAGTCTTTATGCAGCTACTAAAAAATCT
AATGAATTGATGGCACATAGTTATAGTCATCTGTATGATCTTCCTGTTACCGGGCTGAGGTTCTTTACAGTCTATGGGCC
CTGGGGCAGACCAGATATGGCTTTATTTATTTTTGCAGAGAATATGCTTAAAGGCAAACCTATTCAGGTCTTTAATCATG
GAGATATGAAGCGTGATTTTACTTATGTGGATGATGTAGTTAAAGGCATTTATAAATTGACCTCATTACCTGCTCAACCA
GATAATAGCTGGAATGGCAAAGATCCTAATCCAGGCACAAGCAAAGCTCCTTACAGGATTTATAATATTGGTAATAATAG
CCCAGTTAATTTAATGGACTTTATTGAATGTATTGAAGATGAGCTTGGAATTGAAGCTGAAAAAGAATTTAAACCAATGC
AACCTGGTGATGTAAAGATGACTTATGCTGATGTTAAGGATTTAATTGAAGATGTTGGCTATAAACCTGAAACTCCTCTA
AAAACTGGAGTTAAGAGGTTTATTGATTGGTACAGAGAGTATTATGGATTTTAA

Protein sequence :
MSKTHLVTGAAGFIGFHTSKKLLEEGQQVIGLDNLNDYYSVQLKKDRLAILKEYDNFIFIKGDLENNKLVANTFAKYKPE
IVINLAAQAGVRYSLKNPHSYIDSNLVGFMNILEGCRHHDVEHLIFASSSSVYGSNEKVPFSTTDNVDHPVSLYAATKKS
NELMAHSYSHLYDLPVTGLRFFTVYGPWGRPDMALFIFAENMLKGKPIQVFNHGDMKRDFTYVDDVVKGIYKLTSLPAQP
DNSWNGKDPNPGTSKAPYRIYNIGNNSPVNLMDFIECIEDELGIEAEKEFKPMQPGDVKMTYADVKDLIEDVGYKPETPL
KTGVKRFIDWYREYYGF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1I AAA64648.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 6e-103 63