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Name : Halsa_0607 (Halsa_0607) Accession : YP_003994417.1 Strain : Halanaerobium hydrogeniformans sapolanicus Genome accession: NC_014654 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 703388 - 705262 bp Length : 1875 bp Strand : + Note : PFAM: polysaccharide biosynthesis protein CapD; KEGG: ckr:CKR_2815 hypothetical protein DNA sequence : ATGCTCGAATATTTATTAAAATTGTATAAAAAACCACGTTTAATAATCATAGATTTATTATTGATTAATTTTGCCTTAAT ATTTTCTTTTATGCTTCGTTTTGATGAAAATTGGCTGCAGTATTTTAGATTCAGCTATTTTATTGCAATTACTATAATTA GTTTTGTAATCCTATATTTCTCATCTCTATATAACAAGATGTGGCAGTATGCCAGCATGTCAGAACTATACTCCATTTTT AAAGCTGCTCTAGCGATTAATTTTGTTTTTGTGATCTACCTATATTTCTTTAGAGTTGCTTTTCCCCGCAGTATAATAGC AATTAATCTGATGTCAAATATCTTTTTGCTGGGTGGATTTAGATTTTCTTTGCGGCTGCTCAAGGACTTTTTGAACCGCA ACCAAAACAAAAAATCTAAAAGTAGAGTTTTGATTATTGGTGCCGGTGATGCAGCAGAAATAATCATTAGAGAAATGCAC AAACATCCAGAATTAGGCAAAAAAATAGTTGGTTTGGTAGATGATGATCCTGACAAACAATCACTGGAAATTCATGGTTA TGAAGTACTTGGAAAAACCAAAAAGATACCCCAACTTATAGAAGAATATGATGTAGATGAAGTTATTATAGCAATACCTT CTGCAGAAGGTAAGACAATTAAAAGGCTATATAAACTCAGTAATAAAAAAGATGTAAAGGTCAAAATAGTACCTGGAGTT TATGAAATACTCAAAGGTGATGTTTCCTTAAATCAGATTAGGGAAGTTAAAGTAGAAGACCTTTTAAGAAGAGATCAGGT CGACTTAATTACTGATGAAATATCTGACTATCTGGAAGAAAAAACTATTTTAGTAACAGGTGGTGGAGGTTCAATCGGTT CTGAACTCTGCCGACAGTTAGCAAAATTTAATCCAAAAGAAATAATTATTTTTGATATTAATGAAAACAATACATACTTT TTAGAACGCGATTTAGAAGATGAATATCCTGATTTAAAGATAACATCTATTATCGGTAGTATTAGAGATAAGAATAAACT ACAGAATTTATTTAGAGAATTTGAAATTGATGTAGCCTTTCATGCAGCTGCTCACAAACATGTTCCCTTAATGGAAACAA GCCCAGAAGAGGCTGTTAAAAATAATATTCTAGGAAGTAGAAATGTAGCTGAAGTTGCTGCTGAATTTAAGATTGATCGT TTTGTTTTAATTTCCACCGATAAAGCGGTAAATCCAACCAATGTTATGGGGGCTTCTAAAAGAGCTGCCGAAATGATAGT CCAGTCAATTAATAAAAAGTCTGAAACGAAATTTATGGCAGTTCGCTTTGGCAATGTTTTAGGCAGCCAGGGAAGTGTAA TTCCTTTATTTAAGAAGCAGATTGCCAATGGTGGGCCTTTAACGGTAACCCACAAAGATATAACCCGCTATTTTATGACC ATCCCTGAGGCTTCTCAGCTTGTTATACAGGCCGGAGCATTAGGTGAAGGGGGAGAGGTCTTTGTGCTCGATATGGGTGA ACCGGTTAAAATTATGGAATTAGCAGAGGATTTAATTAATCTTTCTGGTTTAACTCCCTATGAAGATATTGATATCGATG TAGTTGGGTTAAGACCGGGAGAAAAGCTTTATGAAGAACTGCTCTGTAATACAGAAGATAATATTGCGACAAAACATCAA AGGATCTTTATCAATAATCTGGAGGCTGTGGATGGAGAGTTTTTAAATATGCATCTAAGTAAATTGGAAAGATTAGCTGA GCAAGCTGATGCTTTAGAGATCATCTCTGCTTTAGTTAATCTTGTTGATAGTTATCAACCGAGGCGAGATAATGTAAAAA AGATCGATTTTAAAAATAAACAGAAATCATCTTAG Protein sequence : MLEYLLKLYKKPRLIIIDLLLINFALIFSFMLRFDENWLQYFRFSYFIAITIISFVILYFSSLYNKMWQYASMSELYSIF KAALAINFVFVIYLYFFRVAFPRSIIAINLMSNIFLLGGFRFSLRLLKDFLNRNQNKKSKSRVLIIGAGDAAEIIIREMH KHPELGKKIVGLVDDDPDKQSLEIHGYEVLGKTKKIPQLIEEYDVDEVIIAIPSAEGKTIKRLYKLSNKKDVKVKIVPGV YEILKGDVSLNQIREVKVEDLLRRDQVDLITDEISDYLEEKTILVTGGGGSIGSELCRQLAKFNPKEIIIFDINENNTYF LERDLEDEYPDLKITSIIGSIRDKNKLQNLFREFEIDVAFHAAAHKHVPLMETSPEEAVKNNILGSRNVAEVAAEFKIDR FVLISTDKAVNPTNVMGASKRAAEMIVQSINKKSETKFMAVRFGNVLGSQGSVIPLFKKQIANGGPLTVTHKDITRYFMT IPEASQLVIQAGALGEGGEVFVLDMGEPVKIMELAEDLINLSGLTPYEDIDIDVVGLRPGEKLYEELLCNTEDNIATKHQ RIFINNLEAVDGEFLNMHLSKLERLAEQADALEIISALVNLVDSYQPRRDNVKKIDFKNKQKSS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 5e-94 | 46 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-90 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Halsa_0607 | YP_003994417.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 1e-89 | 44 |
| Halsa_0607 | YP_003994417.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 2e-81 | 44 |
