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Name : Halsa_0023 (Halsa_0023) Accession : YP_003993877.1 Strain : Halanaerobium hydrogeniformans sapolanicus Genome accession: NC_014654 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 30814 - 32082 bp Length : 1269 bp Strand : + Note : TIGRFAM: seryl-tRNA synthetase; KEGG: hor:Hore_21060 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like DNA sequence : ATGCTAGATATGAGATTTATCAGAGAAAATCCAGAGCTGGTAGAAGAATCTTTTGCCAAGCGCAACATGGATTCTATAAT ACCAGAGTTTCAAAAATTTGATGAAAAGCGGCGTGATCTGCTTTATGAAGCTGAGCAGCTAAAACATAAACGTAATGTTA ATTCTGACAAAATAGGTGAATTAAAAAGAAATGGAGAAGATGCTTCTGAGCTTATTTCTGAAATGCAGGAAGTATCAAGT AGAATCAAAGAATTAGATCAAAAAATTGCAGAGGTAGAAGAAAAATTAGATTGTGTGTTGTTAAGCATTCCTAATATTCC GCATCAGTCTGTACCTGTTGGCAGTGATGAAGAAGATAATAAAGAAGTGAGAACCTGGGGAGAGCCACCAGAATTTGATT TCGATTTTAAAGCTCACTGGGAAATTGGTGAGGATTTAGATATACTTGATTTTGAAAAAGGTGCAAAGGTTACTGGAAGT AGATTTACCTTCTTAAAGGGAGCTGCAGCTCGTTTAGAGAGAAGTTTAGTTAATTTCATGCTTGATTATCATACAGCTGA GCATGATTATGAAGAGGTTTTCCCACCATTTATTGCTAATGCAGATAGTATGACAGGCACTGGACAACTGCCTAAATTTA AAAAAGATATGTTCAAACTTGAAGGTCTTGATTATTATTTAATTCCAACTGCAGAAGTACCTGTAACAAATATGTATAGG GATCAGATTATGGAGCCTCAAGAACTGCCAAAATATTTATGTGCCTATAGTGCTTGCTTTAGAGCAGAGGCAGGTGCACA TGGCCGTGATACCAGAGGAATAATCAGACAGCATCAATTTAATAAGGTAGAAATGGTTAAGTTCGTAAAGCCAGATGACT CTTATCAGGAATTAGAAAAAATAACTGCTGATGCAGAAGATATACTTCAGCAGCTAGGACTTCCTTATCGAGTTGTAACT TTATGTACAGGTGATTTAACATTTTCTTCTGCAAAAACCTATGACTTAGAAGTCTGGATGCCTGCTTATGAAACCTATCG TGAAATATCTTCCTGCAGTAATTTTGAAGATTTTCAGGCCAGAAGAGCAGGAATAAGATATAGACCAGATCCTGATTCCA GCACTGAATTTGTGCATACCTTAAATGGTTCTGGACTTGCAATAGGTAGGACTTTAGCAGCTATCTTAGAAAATTATCAA AATGAAGATGGAAGTGTAACAGTTCCCGAGGTTTTAAGACCATATATGGGAACAGATCTAATTAAATAG Protein sequence : MLDMRFIRENPELVEESFAKRNMDSIIPEFQKFDEKRRDLLYEAEQLKHKRNVNSDKIGELKRNGEDASELISEMQEVSS RIKELDQKIAEVEEKLDCVLLSIPNIPHQSVPVGSDEEDNKEVRTWGEPPEFDFDFKAHWEIGEDLDILDFEKGAKVTGS RFTFLKGAAARLERSLVNFMLDYHTAEHDYEEVFPPFIANADSMTGTGQLPKFKKDMFKLEGLDYYLIPTAEVPVTNMYR DQIMEPQELPKYLCAYSACFRAEAGAHGRDTRGIIRQHQFNKVEMVKFVKPDDSYQELEKITADAEDILQQLGLPYRVVT LCTGDLTFSSAKTYDLEVWMPAYETYREISSCSNFEDFQARRAGIRYRPDPDSSTEFVHTLNGSGLAIGRTLAAILENYQ NEDGSVTVPEVLRPYMGTDLIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-123 | 61 |
